Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05620 and ABID97_RS05625 are separated by 41 nucleotidesABID97_RS05625 and ABID97_RS05630 overlap by 4 nucleotidesABID97_RS05630 and ABID97_RS05635 are separated by 102 nucleotidesABID97_RS05635 and ABID97_RS05640 are separated by 99 nucleotides ABID97_RS05620: ABID97_RS05620 - PLP-dependent aminotransferase family protein, at 1,180,612 to 1,181,814 _RS05620 ABID97_RS05625: ABID97_RS05625 - DMT family transporter, at 1,181,856 to 1,182,809 _RS05625 ABID97_RS05630: ABID97_RS05630 - LysE family translocator, at 1,182,806 to 1,183,405 _RS05630 ABID97_RS05635: ABID97_RS05635 - PLP-dependent aminotransferase family protein, at 1,183,508 to 1,184,923 _RS05635 ABID97_RS05640: ABID97_RS05640 - PhaM family polyhydroxyalkanoate granule multifunctional regulatory protein, at 1,185,023 to 1,185,772 _RS05640
Group Condition ABID97_RS05620 ABID97_RS05625 ABID97_RS05630 ABID97_RS05635 ABID97_RS05640
carbon source L-Tryptophan (C) -0.2 -0.3 -0.6 +0.0 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.3 -0.4 -0.1 -0.8
carbon source casaminos (C) -0.0 -0.2 -0.1 -0.0 -1.1
carbon source D,L-Malic Acid (C) -0.6 -0.4 -0.4 -0.1 +0.0
carbon source acetate (C) -0.2 -0.2 -0.5 -0.1 -0.4
carbon source D-Glucose (C) -0.4 -0.3 -0.3 -0.1 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 -0.3 +0.1 -0.5
carbon source D-Mannose (C) -0.1 +0.1 +0.0 +0.2 -1.5
carbon source L-Proline (C) -0.4 -0.2 -0.3 +0.1 -0.4
carbon source Ethanol (C) -0.1 -0.2 -0.4 +0.0 -0.4
carbon source D-Arabinose (C) -0.3 -0.1 -0.0 +0.1 -0.9
carbon source L-Tryptophan (C) -0.2 -0.3 -0.3 -0.1 -0.1
carbon source L-Proline (C) -0.2 -0.3 -0.2 +0.0 -0.4
carbon source L-Glutamic (C) -0.2 -0.1 -0.3 +0.0 -0.5
carbon source a-Ketoglutaric (C) -0.2 -0.2 -0.4 +0.1 -0.3
carbon source L-Glutamine (C) +0.0 -0.2 -0.4 +0.1 -0.5
carbon source Glycolic Acid (C) -0.1 -0.6 -0.2 +0.1 -0.0
carbon source L-Phenylalanine (C) -0.4 -0.1 -0.4 -0.2 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.0 +0.1 +0.1 -1.1
carbon source Gly-Glu (C) -0.0 -0.2 -0.5 +0.1 -0.3
carbon source L-Phenylalanine (C) -0.5 -0.1 -0.3 -0.1 +0.2
r2a outgrowth control R2A outgrowth control -0.1 -0.1 -0.0 +0.2 -0.6
carbon source Tween 20 (C) -0.2 +0.1 -0.1 +0.2 -0.6
carbon source propionate (C) -0.2 +0.2 +0.0 +0.2 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +0.1 +0.5 -1.1
carbon source Fumarate (C) -0.1 -0.3 -0.2 +0.2 +0.3
carbon source L-tyrosine (C) +0.0 -0.1 +0.3 +0.2 -0.5
phage V2_100 +0.2 +0.2 +0.2 -0.2 +0.4
carbon source L-Histidine (C) +1.0 +1.4 +0.9 +0.3 -0.7
carbon source L-Histidine (C) +1.4 +1.2 +0.9 +0.3 -0.3
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ABID97_RS05620
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ABID97_RS05625
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ABID97_RS05635
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ABID97_RS05640
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