Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05590 and ABID97_RS05595 are separated by 5 nucleotidesABID97_RS05595 and ABID97_RS05600 are separated by 10 nucleotidesABID97_RS05600 and ABID97_RS05605 are separated by 5 nucleotidesABID97_RS05605 and ABID97_RS05610 are separated by 4 nucleotides ABID97_RS05590: ABID97_RS05590 - LysE family translocator, at 1,176,357 to 1,176,989 _RS05590 ABID97_RS05595: ABID97_RS05595 - VOC family protein, at 1,176,995 to 1,177,687 _RS05595 ABID97_RS05600: ABID97_RS05600 - PhzF family phenazine biosynthesis protein, at 1,177,698 to 1,178,624 _RS05600 ABID97_RS05605: ABID97_RS05605 - glutathione S-transferase, at 1,178,630 to 1,179,271 _RS05605 ABID97_RS05610: ABID97_RS05610 - LysE family translocator, at 1,179,276 to 1,179,947 _RS05610
Group Condition ABID97_RS05590 ABID97_RS05595 ABID97_RS05600 ABID97_RS05605 ABID97_RS05610
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.2 -0.5 -0.1 -0.5
carbon source L-Threonine (C) +0.2 +0.1 -1.0 -0.4 -0.1
phage V2_100 -0.1 -0.0 +0.1 -0.3 -0.7
carbon source D-Glucose (C) -0.1 -0.0 -0.5 -0.4 +0.2
carbon source pyruvate (C) +0.1 -0.3 +0.1 +0.2 -0.8
carbon source L-Leucine (C) +0.0 -0.2 +0.3 -0.2 -0.5
control NP +0.1 -0.1 +0.1 +0.2 -0.8
carbon source succinate (C) +0.1 -0.4 -0.3 +0.2 +0.3
carbon source L-tyrosine (C) -0.3 +0.3 +0.3 -0.0 -0.4
carbon source D-Sorbitol (C) -0.0 -0.1 +0.6 -0.0 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.3 +0.3 -0.1 +0.3
carbon source D,L-Malic Acid (C) -0.1 -0.5 +0.0 +0.3 +0.3
carbon source butyrate (C) -0.2 +0.4 +0.4 -0.2 -0.2
carbon source D,L-Malic Acid (C) -0.2 -0.2 +0.0 -0.1 +0.7
phage V2_1 -0.0 -0.5 +0.4 +0.1 +0.3
carbon source casaminos (C) +0.0 +0.5 +0.5 -0.3 -0.3
carbon source propionate (C) -0.2 +0.0 +0.2 -0.2 +0.6
carbon source L-Threonine (C) -0.0 -0.1 -0.1 -0.2 +1.0
carbon source D-Ribose (C) -0.1 -0.3 -0.1 +0.3 +0.8
carbon source Tween 20 (C) -0.1 +0.2 +0.6 -0.2 +0.2
carbon source Ethanol (C) +0.0 -0.0 +0.1 -0.1 +0.9
carbon source D-Ribose (C) +0.0 -0.1 +0.1 +0.1 +0.8
carbon source L-Glutamine (C) +0.0 +0.4 -0.1 +0.3 +0.5
carbon source L-Arabinose (C) +0.2 +0.6 +0.3 -0.1 +0.2
carbon source L-tyrosine (C) +0.1 +0.1 +0.4 -0.3 +0.8
carbon source Ethanol (C) +0.0 +0.2 +0.2 +0.3 +0.6
carbon source Formate (C) -0.1 -0.2 +0.5 +0.1 +1.0
carbon source Glycolic Acid (C) +0.0 +0.2 +0.2 +0.2 +0.9
carbon source L-Histidine (C) +0.3 -0.2 -0.8 +0.3 +2.0
carbon source L-Histidine (C) +0.2 +0.3 -0.6 +0.3 +2.1
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