Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS05580 and ABID97_RS05585 are separated by 299 nucleotidesABID97_RS05585 and ABID97_RS05590 are separated by 13 nucleotidesABID97_RS05590 and ABID97_RS05595 are separated by 5 nucleotidesABID97_RS05595 and ABID97_RS05600 are separated by 10 nucleotides ABID97_RS05580: ABID97_RS05580 - creatininase family protein, at 1,174,239 to 1,175,066 _RS05580 ABID97_RS05585: ABID97_RS05585 - threonine dehydratase, at 1,175,366 to 1,176,343 _RS05585 ABID97_RS05590: ABID97_RS05590 - LysE family translocator, at 1,176,357 to 1,176,989 _RS05590 ABID97_RS05595: ABID97_RS05595 - VOC family protein, at 1,176,995 to 1,177,687 _RS05595 ABID97_RS05600: ABID97_RS05600 - PhzF family phenazine biosynthesis protein, at 1,177,698 to 1,178,624 _RS05600
Group Condition ABID97_RS05580 ABID97_RS05585 ABID97_RS05590 ABID97_RS05595 ABID97_RS05600
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.3 -0.4 -0.2 -0.5
carbon source L-Phenylalanine (C) N.D. -0.2 -0.2 +0.1 -0.4
carbon source L-Tryptophan (C) N.D. -0.2 -0.3 -0.2 +0.0
carbon source D-Fructose (C) N.D. -0.4 -0.2 -0.1 +0.1
phage V1_10 N.D. -0.2 -0.1 -0.3 +0.1
carbon source succinate (C) N.D. +0.2 +0.1 -0.4 -0.3
carbon source L-Threonine (C) N.D. +0.4 +0.2 +0.1 -1.0
carbon source L-Histidine (C) N.D. +0.4 +0.3 -0.2 -0.8
carbon source acetate (C) N.D. +0.2 +0.1 -0.2 -0.5
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 -0.1 -0.3 +0.3
carbon source L-Proline (C) N.D. +0.4 +0.0 -0.6 +0.1
phage V2_1 N.D. +0.0 -0.0 -0.5 +0.4
carbon source L-Histidine (C) N.D. +0.0 +0.2 +0.3 -0.6
carbon source pyruvate (C) N.D. +0.2 +0.1 -0.3 +0.1
carbon source L-Fucose (C) N.D. -0.4 +0.0 +0.2 +0.3
carbon source L-Phenylalanine (C) N.D. +0.4 +0.2 -0.3 -0.1
carbon source Formate (C) N.D. +0.0 -0.1 -0.2 +0.5
carbon source D-Sorbitol (C) N.D. -0.1 -0.0 -0.1 +0.6
r2a outgrowth control R2A outgrowth control N.D. -0.3 +0.0 +0.2 +0.4
carbon source propionate (C) N.D. +0.3 +0.2 -0.2 +0.0
carbon source propionate (C) N.D. +0.4 -0.2 +0.0 +0.2
carbon source Adenine (C) N.D. -0.2 +0.2 +0.3 +0.2
carbon source L-tyrosine (C) N.D. +0.2 -0.3 +0.3 +0.3
carbon source Gly-Glu (C) N.D. +0.1 +0.1 -0.1 +0.6
carbon source L-Leucine (C) N.D. +0.1 +0.0 -0.1 +0.7
carbon source L-Alanine (C) N.D. +0.3 +0.3 +0.2 +0.1
carbon source Tween 20 (C) N.D. +0.2 -0.1 +0.2 +0.6
carbon source butyrate (C) N.D. +0.5 -0.2 +0.4 +0.4
carbon source casaminos (C) N.D. +0.3 +0.0 +0.5 +0.5
carbon source L-Arabinose (C) N.D. +0.4 +0.2 +0.6 +0.3
remove
ABID97_RS05580
plot		 remove
ABID97_RS05585
plot		 remove
ABID97_RS05590		 remove
ABID97_RS05595
plot		 remove
ABID97_RS05600
plot