Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05570 and ABID97_RS05575 overlap by 4 nucleotidesABID97_RS05575 and ABID97_RS05580 are separated by 80 nucleotidesABID97_RS05580 and ABID97_RS05585 are separated by 299 nucleotidesABID97_RS05585 and ABID97_RS05590 are separated by 13 nucleotides ABID97_RS05570: ABID97_RS05570 - LysR family transcriptional regulator, at 1,172,456 to 1,173,364 _RS05570 ABID97_RS05575: ABID97_RS05575 - SDR family oxidoreductase, at 1,173,361 to 1,174,158 _RS05575 ABID97_RS05580: ABID97_RS05580 - creatininase family protein, at 1,174,239 to 1,175,066 _RS05580 ABID97_RS05585: ABID97_RS05585 - threonine dehydratase, at 1,175,366 to 1,176,343 _RS05585 ABID97_RS05590: ABID97_RS05590 - LysE family translocator, at 1,176,357 to 1,176,989 _RS05590
Group Condition ABID97_RS05570 ABID97_RS05575 ABID97_RS05580 ABID97_RS05585 ABID97_RS05590
carbon source L-Phenylalanine (C) -0.9 -0.3 N.D. -0.2 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.7 -0.4 N.D. -0.1 -0.1
carbon source L-Tryptophan (C) -0.4 -0.2 N.D. -0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.0 N.D. -0.3 -0.4
carbon source Fumarate (C) -0.5 -0.2 N.D. -0.2 -0.1
carbon source D-Fructose (C) -0.2 -0.0 N.D. -0.4 -0.2
carbon source L-tyrosine (C) -0.7 +0.1 N.D. +0.2 -0.3
carbon source D-Ribose (C) -0.8 +0.2 N.D. -0.0 +0.0
carbon source D-Lactate (C) -0.3 -0.2 N.D. +0.1 -0.2
carbon source D-Serine (C) -0.6 +0.1 N.D. +0.1 -0.1
carbon source Ethanol (C) -0.3 +0.1 N.D. -0.3 +0.0
carbon source propionate (C) -0.8 -0.1 N.D. +0.3 +0.2
carbon source propionate (C) -0.5 -0.1 N.D. +0.4 -0.2
carbon source D-Arabinose (C) -0.4 -0.2 N.D. +0.2 +0.0
carbon source Glucuronamide (C) -0.5 +0.2 N.D. -0.1 +0.1
carbon source D-Gluconic Acid (C) -0.8 +0.1 N.D. +0.4 +0.1
carbon source L-Alanine (C) -0.7 +0.2 N.D. +0.2 +0.1
carbon source L-Tryptophan (C) -0.4 +0.2 N.D. +0.2 +0.0
phage V2_100 +0.5 -0.4 N.D. +0.1 -0.1
carbon source butyrate (C) -0.2 +0.1 N.D. +0.5 -0.2
phage V2_10 +0.4 -0.2 N.D. -0.2 +0.1
carbon source L-Arabinose (C) -0.1 -0.2 N.D. +0.4 +0.2
carbon source L-Alanine (C) -0.3 +0.1 N.D. +0.3 +0.3
phage V2_1 +0.6 -0.2 N.D. +0.0 -0.0
carbon source L-Threonine (C) -0.1 +0.2 N.D. +0.4 +0.2
phage V1_1 +0.6 -0.1 N.D. +0.1 +0.1
carbon source L-Threonine (C) +0.4 +0.1 N.D. +0.2 -0.0
carbon source D-Gluconic Acid (C) +0.3 +0.0 N.D. +0.3 +0.1
carbon source casaminos (C) +0.4 +0.1 N.D. +0.3 +0.0
carbon source L-Histidine (C) -0.0 +0.2 N.D. +0.4 +0.3
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