Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05080 and ABID97_RS05085 are separated by 44 nucleotidesABID97_RS05085 and ABID97_RS05090 are separated by 79 nucleotidesABID97_RS05090 and ABID97_RS05095 are separated by 24 nucleotidesABID97_RS05095 and ABID97_RS05100 are separated by 43 nucleotides ABID97_RS05080: ABID97_RS05080 - pentapeptide repeat-containing protein, at 1,074,675 to 1,075,727 _RS05080 ABID97_RS05085: ABID97_RS05085 - hypothetical protein, at 1,075,772 to 1,075,954 _RS05085 ABID97_RS05090: ABID97_RS05090 - DUF3540 domain-containing protein, at 1,076,034 to 1,076,417 _RS05090 ABID97_RS05095: ABID97_RS05095 - DUF4150 domain-containing protein, at 1,076,442 to 1,076,837 _RS05095 ABID97_RS05100: ABID97_RS05100 - type VI secretion system tip protein TssI/VgrG, at 1,076,881 to 1,079,283 _RS05100
Group Condition ABID97_RS05080 ABID97_RS05085 ABID97_RS05090 ABID97_RS05095 ABID97_RS05100
carbon source L-tyrosine (C) N.D. N.D. N.D. -2.6 -0.1
carbon source L-Fucose (C) N.D. N.D. N.D. -2.0 -0.2
carbon source L-Histidine (C) N.D. N.D. N.D. -2.6 +0.6
carbon source Gly-Glu (C) N.D. N.D. N.D. -1.6 -0.0
carbon source Formate (C) N.D. N.D. N.D. -1.6 -0.0
carbon source pyruvate (C) N.D. N.D. N.D. -1.7 +0.1
carbon source D,L-Lactate (C) N.D. N.D. N.D. -1.7 +0.0
carbon source L-Glutamic (C) N.D. N.D. N.D. -1.2 -0.1
phage V2_10 N.D. N.D. N.D. -1.1 -0.2
carbon source butyrate (C) N.D. N.D. N.D. -1.2 -0.0
control NP N.D. N.D. N.D. -1.1 -0.0
carbon source Formate (C) N.D. N.D. N.D. -0.9 -0.2
carbon source propionate (C) N.D. N.D. N.D. -1.1 +0.1
carbon source D,L-Malic Acid (C) N.D. N.D. N.D. -1.0 +0.3
carbon source D-Sorbitol (C) N.D. N.D. N.D. -1.0 +0.3
carbon source L-Threonine (C) N.D. N.D. N.D. -1.0 +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. -0.8 +0.4
carbon source casaminos (C) N.D. N.D. N.D. +0.9 -0.6
carbon source L-Alanine (C) N.D. N.D. N.D. +0.8 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. +1.3 -0.3
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. +0.9 +0.2
carbon source Glycolic Acid (C) N.D. N.D. N.D. +0.9 +0.2
carbon source acetate (C) N.D. N.D. N.D. +0.9 +0.2
carbon source acetate (C) N.D. N.D. N.D. +0.9 +0.2
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. +1.1 +0.0
carbon source Ethanol (C) N.D. N.D. N.D. +1.0 +0.2
carbon source L-Arabinose (C) N.D. N.D. N.D. +1.0 +0.3
carbon source D,L-Malic Acid (C) N.D. N.D. N.D. +1.1 +0.3
carbon source L-Asparagine (C) N.D. N.D. N.D. +1.3 +0.2
carbon source D-Serine (C) N.D. N.D. N.D. +1.2 +0.4
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ABID97_RS05080
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