Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05065 and ABID97_RS05070 are separated by 24 nucleotidesABID97_RS05070 and ABID97_RS05075 are separated by 19 nucleotidesABID97_RS05075 and ABID97_RS05080 overlap by 4 nucleotidesABID97_RS05080 and ABID97_RS05085 are separated by 44 nucleotides ABID97_RS05065: ABID97_RS05065 - type VI secretion system ATPase TssH, at 1,066,272 to 1,069,001 _RS05065 ABID97_RS05070: ABID97_RS05070 - type VI secretion system tip protein TssI/VgrG, at 1,069,026 to 1,072,064 _RS05070 ABID97_RS05075: ABID97_RS05075 - DUF2169 domain-containing protein, at 1,072,084 to 1,074,678 _RS05075 ABID97_RS05080: ABID97_RS05080 - pentapeptide repeat-containing protein, at 1,074,675 to 1,075,727 _RS05080 ABID97_RS05085: ABID97_RS05085 - hypothetical protein, at 1,075,772 to 1,075,954 _RS05085
Group Condition ABID97_RS05065 ABID97_RS05070 ABID97_RS05075 ABID97_RS05080 ABID97_RS05085
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.5 -0.5 N.D. N.D.
carbon source D-Glucose (C) -0.5 -0.1 -0.3 N.D. N.D.
carbon source L-Arabinose (C) -0.4 -0.1 -0.4 N.D. N.D.
carbon source Fumarate (C) -0.5 -0.5 +0.3 N.D. N.D.
carbon source succinate (C) -0.3 -0.2 -0.1 N.D. N.D.
carbon source D-Lactate (C) -0.3 -0.3 -0.1 N.D. N.D.
carbon source L-Asparagine (C) -0.5 +0.1 -0.1 N.D. N.D.
carbon source D-Glucose (C) -0.5 -0.1 +0.2 N.D. N.D.
phage V1_1 -0.6 +0.3 -0.2 N.D. N.D.
carbon source Tween 20 (C) -0.5 -0.0 +0.2 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.4 +0.2 -0.2 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.2 +0.2 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.2 +0.3 -0.3 N.D. N.D.
phage V2_1 -0.3 +0.3 -0.1 N.D. N.D.
carbon source L-Lactate (C) -0.4 +0.2 +0.1 N.D. N.D.
phage V1_10 -0.4 +0.1 +0.2 N.D. N.D.
carbon source propionate (C) +0.0 -0.4 +0.2 N.D. N.D.
carbon source L-Glutamic (C) -0.4 +0.4 -0.1 N.D. N.D.
carbon source Tween 20 (C) -0.4 +0.2 +0.1 N.D. N.D.
carbon source Formate (C) +0.2 -0.3 +0.2 N.D. N.D.
carbon source pyruvate (C) -0.2 +0.2 +0.2 N.D. N.D.
carbon source D-Mannose (C) -0.2 +0.3 +0.1 N.D. N.D.
carbon source L-Fucose (C) +0.2 +0.3 -0.1 N.D. N.D.
carbon source Ethanol (C) -0.1 +0.2 +0.5 N.D. N.D.
carbon source Glucuronamide (C) +0.3 +0.2 +0.1 N.D. N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.2 +0.2 N.D. N.D.
phage V2_100 +0.5 +0.4 -0.2 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.6 +0.2 -0.0 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.4 +0.4 N.D. N.D.
carbon source L-tyrosine (C) +0.8 +0.3 -0.1 N.D. N.D.
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ABID97_RS05065
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ABID97_RS05070
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ABID97_RS05080
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ABID97_RS05085
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