Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS05040 and ABID97_RS05045 are separated by 27 nucleotidesABID97_RS05045 and ABID97_RS05050 overlap by 25 nucleotidesABID97_RS05050 and ABID97_RS05055 overlap by 4 nucleotidesABID97_RS05055 and ABID97_RS05060 are separated by 184 nucleotides ABID97_RS05040: ABID97_RS05040 - type VI secretion system baseplate subunit TssE, at 1,061,383 to 1,061,895 _RS05040 ABID97_RS05045: ABID97_RS05045 - type VI secretion system baseplate subunit TssF, at 1,061,923 to 1,063,815 _RS05045 ABID97_RS05050: ABID97_RS05050 - type VI secretion system baseplate subunit TssG, at 1,063,791 to 1,064,870 _RS05050 ABID97_RS05055: ABID97_RS05055 - tetratricopeptide repeat protein, at 1,064,867 to 1,065,343 _RS05055 ABID97_RS05060: ABID97_RS05060 - methyltransferase domain-containing protein, at 1,065,528 to 1,066,202 _RS05060
Group Condition ABID97_RS05040 ABID97_RS05045 ABID97_RS05050 ABID97_RS05055 ABID97_RS05060
carbon source L-Lactate (C) N.D. -0.5 -0.2 -0.4 -0.5
carbon source D-Sorbitol (C) N.D. -0.3 -0.3 -0.7 -0.2
carbon source L-Asparagine (C) N.D. -0.2 -0.3 -1.0 +0.0
carbon source L-Proline (C) N.D. +0.1 -0.4 -0.8 -0.1
carbon source L-Phenylalanine (C) N.D. +0.2 -0.4 -0.6 -0.3
carbon source D-Arabinose (C) N.D. -0.1 +0.3 -0.8 -0.1
carbon source Fumarate (C) N.D. -0.3 -0.4 +0.3 -0.4
carbon source D-Gluconic Acid (C) N.D. +0.2 +0.5 -1.5 +0.1
carbon source L-Proline (C) N.D. +0.2 +0.0 -0.9 +0.1
carbon source D-Serine (C) N.D. -0.0 +0.4 -0.8 -0.0
carbon source L-Leucine (C) N.D. +0.3 +0.2 -0.6 -0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +0.4 -0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 -1.1 +0.8 +0.2
carbon source L-Lactate (C) N.D. +0.1 +0.4 -0.4 -0.4
carbon source D,L-Malic Acid (C) N.D. -0.3 -0.6 +0.8 -0.1
carbon source L-Histidine (C) N.D. +0.3 -0.5 +0.3 -0.2
carbon source D-Arabinose (C) N.D. +0.6 -0.1 -0.6 +0.1
carbon source propionate (C) N.D. -0.4 -0.8 +1.1 +0.1
carbon source L-Glutamine (C) N.D. +0.3 +0.4 -0.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.4 -0.2 +0.5 +0.4
carbon source L-Tryptophan (C) N.D. +0.5 +0.3 -0.4 +0.2
carbon source casaminos (C) N.D. +0.1 -0.1 +0.9 -0.2
carbon source L-Histidine (C) N.D. +0.6 +0.5 -0.3 +0.2
carbon source D-Mannose (C) N.D. +0.4 -0.2 +0.9 +0.0
carbon source D,L-Lactate (C) N.D. +0.2 +0.1 +0.9 +0.1
carbon source Glucuronamide (C) N.D. +0.1 +0.4 +0.9 +0.1
carbon source Ethanol (C) N.D. +0.3 +0.2 +1.0 +0.0
carbon source propionate (C) N.D. +0.4 -0.3 +1.5 -0.1
carbon source L-Arabinose (C) N.D. +0.6 +0.3 +0.9 +0.0
carbon source L-tyrosine (C) N.D. +0.5 +0.8 +1.4 +0.0
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ABID97_RS05040
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