Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04980 and ABID97_RS04985 are separated by 138 nucleotidesABID97_RS04985 and ABID97_RS04990 are separated by 32 nucleotidesABID97_RS04990 and ABID97_RS04995 overlap by 4 nucleotidesABID97_RS04995 and ABID97_RS05000 overlap by 4 nucleotides ABID97_RS04980: ABID97_RS04980 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 1,044,051 to 1,045,106 _RS04980 ABID97_RS04985: ABID97_RS04985 - type VI secretion system baseplate subunit TssK, at 1,045,245 to 1,046,576 _RS04985 ABID97_RS04990: ABID97_RS04990 - DotU family type VI secretion system protein, at 1,046,609 to 1,047,937 _RS04990 ABID97_RS04995: ABID97_RS04995 - type VI secretion system membrane subunit TssM, at 1,047,934 to 1,051,533 _RS04995 ABID97_RS05000: ABID97_RS05000 - type VI secretion system-associated protein TagF, at 1,051,530 to 1,052,180 _RS05000
Group Condition ABID97_RS04980 ABID97_RS04985 ABID97_RS04990 ABID97_RS04995 ABID97_RS05000
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.2 -0.6 -0.6 -0.3
carbon source D-Glucose (C) -0.2 -0.2 -0.5 -0.4 -0.5
carbon source Gly-Glu (C) -0.1 +0.1 -0.3 -0.6 -0.6
carbon source Fumarate (C) -0.2 -0.2 -0.6 -0.4 +0.1
carbon source Fumarate (C) +0.2 -0.1 -0.4 -0.4 -0.5
carbon source L-Leucine (C) +0.3 +0.6 -0.3 +0.0 +0.3
carbon source L-Malic (C) +0.3 +0.9 -0.2 -0.0 +0.2
carbon source Ethanol (C) +0.3 -0.1 +0.2 +0.2 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.9 +0.5 +0.1 -0.0
carbon source L-Threonine (C) +0.4 +0.5 +0.1 +0.3 +0.2
carbon source a-Ketoglutaric (C) +0.2 +0.1 +0.1 +0.4 +0.7
carbon source a-Ketoglutaric (C) +0.8 +0.4 +0.0 +0.1 +0.2
carbon source D,L-Lactate (C) +0.3 +0.2 -0.1 +0.3 +0.8
carbon source L-Asparagine (C) +0.4 +0.5 +0.1 +0.2 +0.5
carbon source D-Serine (C) +0.1 +0.4 +0.2 +0.3 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.4 +0.6 +0.2 -0.1
carbon source Adenine (C) +0.5 -0.0 +0.3 +0.2 +0.7
carbon source L-Tryptophan (C) +0.1 +0.6 +0.2 +0.2 +0.7
carbon source L-Lactate (C) +0.3 +0.6 +0.1 +0.1 +0.6
carbon source Tween 20 (C) +0.6 +0.3 +0.0 +0.2 +0.7
carbon source D-Mannose (C) +0.5 +0.4 +0.3 +0.3 +0.4
carbon source D-Serine (C) +0.4 +0.7 +0.1 +0.3 +0.4
carbon source L-Threonine (C) +0.4 +0.6 +0.3 +0.1 +0.5
carbon source D,L-Lactate (C) +0.4 +0.7 +0.2 +0.1 +0.6
carbon source D-Glucuronic Acid (C) +0.4 +0.5 -0.1 +0.5 +0.7
carbon source D,L-Malic Acid (C) +0.3 +0.6 +0.1 +0.3 +0.7
carbon source Formate (C) +0.3 +0.3 +0.4 +0.2 +0.7
carbon source L-Malic (C) +0.4 +0.3 +0.3 +0.4 +0.6
carbon source D-Ribose (C) +0.5 +0.6 +0.1 +0.3 +0.6
carbon source Ethanol (C) +0.2 +0.9 +0.1 +0.3 +0.7
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ABID97_RS04980
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