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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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500 nt
ABID97_RS04895 and ABID97_RS04900 are separated by 122 nucleotides
ABID97_RS04900 and ABID97_RS04905 are separated by 71 nucleotides
ABID97_RS04905 and ABID97_RS04910 are separated by 6 nucleotides
ABID97_RS04910 and ABID97_RS04915 are separated by 143 nucleotides
ABID97_RS04895: ABID97_RS04895 - site-specific recombinase, at 1,017,783 to 1,019,759
_RS04895
ABID97_RS04900: ABID97_RS04900 - Co2+/Mg2+ efflux protein ApaG, at 1,019,882 to 1,020,277
_RS04900
ABID97_RS04905: ABID97_RS04905 - ribulose-phosphate 3-epimerase, at 1,020,349 to 1,021,041
_RS04905
ABID97_RS04910: ABID97_RS04910 - hypothetical protein, at 1,021,048 to 1,021,320
_RS04910
ABID97_RS04915: ABID97_RS04915 - succinylglutamate desuccinylase/aspartoacylase family protein, at 1,021,464 to 1,022,471
_RS04915
Group
Condition
ABID97
_RS04895
ABID97
_RS04900
ABID97
_RS04905
ABID97
_RS04910
ABID97
_RS04915
carbon source
L-Histidine (C)
-1.0
-0.6
N.D.
N.D.
-0.2
carbon source
L-Histidine (C)
-0.9
-0.5
N.D.
N.D.
-0.5
carbon source
Gly-Glu (C)
-0.7
-0.6
N.D.
N.D.
-0.1
carbon source
Gly-Glu (C)
-0.6
-0.3
N.D.
N.D.
-0.1
carbon source
L-Alanine (C)
-0.4
-0.1
N.D.
N.D.
-0.4
carbon source
D-Gluconic Acid (C)
-0.4
-0.3
N.D.
N.D.
-0.1
carbon source
Glycolic Acid (C)
-0.5
-0.3
N.D.
N.D.
-0.0
carbon source
D-Glucose (C)
-0.2
-0.4
N.D.
N.D.
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
-0.5
-0.2
N.D.
N.D.
-0.1
carbon source
D-Glucose (C)
-0.3
-0.3
N.D.
N.D.
-0.2
carbon source
Glucuronamide (C)
-0.2
-0.2
N.D.
N.D.
-0.3
carbon source
D-Gluconic Acid (C)
-0.4
-0.2
N.D.
N.D.
-0.0
carbon source
D-Glucuronic Acid (C)
-0.4
-0.4
N.D.
N.D.
+0.1
carbon source
L-Alanine (C)
-0.4
-0.3
N.D.
N.D.
+0.0
carbon source
L-Phenylalanine (C)
-0.3
-0.3
N.D.
N.D.
-0.0
carbon source
L-Phenylalanine (C)
-0.3
-0.3
N.D.
N.D.
-0.1
carbon source
Glycolic Acid (C)
-0.4
-0.2
N.D.
N.D.
-0.1
carbon source
D-Serine (C)
-0.2
-0.3
N.D.
N.D.
-0.1
carbon source
acetate (C)
-0.3
-0.3
N.D.
N.D.
-0.1
carbon source
L-Proline (C)
-0.3
-0.2
N.D.
N.D.
-0.1
carbon source
Glucuronamide (C)
-0.2
-0.0
N.D.
N.D.
-0.3
carbon source
butyrate (C)
-0.2
-0.3
N.D.
N.D.
-0.0
carbon source
pyruvate (C)
-0.3
-0.2
N.D.
N.D.
+0.1
carbon source
Tween 20 (C)
-0.3
-0.2
N.D.
N.D.
+0.2
carbon source
butyrate (C)
-0.3
-0.2
N.D.
N.D.
+0.2
carbon source
L-Glutamine (C)
-0.3
-0.1
N.D.
N.D.
+0.2
carbon source
propionate (C)
+0.3
-0.3
N.D.
N.D.
-0.0
phage
V2_100
+0.4
-0.1
N.D.
N.D.
-0.1
carbon source
a-Ketoglutaric (C)
-0.1
+0.5
N.D.
N.D.
+0.0
carbon source
L-Threonine (C)
-0.1
+0.1
N.D.
N.D.
+0.4
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