Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS04595 and ABID97_RS04600 are separated by 79 nucleotidesABID97_RS04600 and ABID97_RS04605 are separated by 120 nucleotidesABID97_RS04605 and ABID97_RS04610 are separated by 178 nucleotidesABID97_RS04610 and ABID97_RS04615 are separated by 20 nucleotides ABID97_RS04595: ABID97_RS04595 - DNA polymerase III subunit delta, at 956,610 to 957,683 _RS04595 ABID97_RS04600: ABID97_RS04600 - glutamate-5-semialdehyde dehydrogenase, at 957,763 to 959,055 _RS04600 ABID97_RS04605: ABID97_RS04605 - glutamate--cysteine ligase, at 959,176 to 960,483 _RS04605 ABID97_RS04610: ABID97_RS04610 - potassium transporter Kup, at 960,662 to 962,533 _RS04610 ABID97_RS04615: ABID97_RS04615 - polysaccharide deacetylase family protein, at 962,554 to 963,477 _RS04615
Group Condition ABID97_RS04595 ABID97_RS04600 ABID97_RS04605 ABID97_RS04610 ABID97_RS04615
carbon source Glycolic Acid (C) N.D. N.D. -5.0 -4.2 +0.1
carbon source D,L-Malic Acid (C) N.D. N.D. -0.4 -6.9 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -4.1 -3.3 +0.2
carbon source D-Gluconic Acid (C) N.D. N.D. +0.9 -7.1 -0.1
carbon source D-Gluconic Acid (C) N.D. N.D. +1.0 -7.0 -0.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -2.8 -2.3 +0.0
carbon source Gly-Glu (C) N.D. N.D. +0.4 -4.7 -0.1
carbon source Gly-Glu (C) N.D. N.D. +0.4 -4.4 +0.0
carbon source D-Glucuronic Acid (C) N.D. N.D. -0.0 -3.6 +0.0
carbon source D-Mannose (C) N.D. N.D. +0.3 -3.7 +0.0
carbon source D-Mannose (C) N.D. N.D. +0.2 -3.1 -0.1
carbon source D-Arabinose (C) N.D. N.D. -2.1 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -1.7 -1.1 +0.1
carbon source Glycolic Acid (C) N.D. N.D. -0.1 -2.6 +0.1
carbon source D-Fructose (C) N.D. N.D. -0.6 -1.9 +0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -1.0 -1.4 -0.1
carbon source D-Arabinose (C) N.D. N.D. -2.2 -0.4 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -1.0 -1.1 -0.0
carbon source L-tyrosine (C) N.D. N.D. -0.8 -1.1 -0.2
carbon source Tween 20 (C) N.D. N.D. -0.7 -1.4 +0.0
carbon source D-Fructose (C) N.D. N.D. -0.6 -1.6 +0.2
carbon source D-Xylose (C) N.D. N.D. +0.0 -1.9 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -1.2 -1.0 +0.2
carbon source D-Xylose (C) N.D. N.D. -0.1 -1.9 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -1.1 -0.8 +0.2
carbon source L-Phenylalanine (C) N.D. N.D. -2.3 +0.7 +0.0
carbon source D-Glucose (C) N.D. N.D. +0.4 -1.7 -0.1
carbon source L-Phenylalanine (C) N.D. N.D. -2.3 +1.0 +0.2
carbon source butyrate (C) N.D. N.D. +1.5 -0.6 +0.2
carbon source butyrate (C) N.D. N.D. +1.6 -0.4 -0.1
remove
ABID97_RS04595
plot		 remove
ABID97_RS04600
plot		 remove
ABID97_RS04605		 remove
ABID97_RS04610
plot		 remove
ABID97_RS04615
plot