Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04575 and ABID97_RS04580 overlap by 8 nucleotidesABID97_RS04580 and ABID97_RS04585 are separated by 123 nucleotidesABID97_RS04585 and ABID97_RS04590 are separated by 14 nucleotidesABID97_RS04590 and ABID97_RS04595 are separated by 20 nucleotides ABID97_RS04575: ABID97_RS04575 - NAD/NADP octopine/nopaline dehydrogenase family protein, at 951,250 to 952,329 _RS04575 ABID97_RS04580: ABID97_RS04580 - tripartite tricarboxylate transporter substrate binding protein, at 952,322 to 953,299 _RS04580 ABID97_RS04585: ABID97_RS04585 - leucine--tRNA ligase, at 953,423 to 956,053 _RS04585 ABID97_RS04590: ABID97_RS04590 - LPS assembly lipoprotein LptE, at 956,068 to 956,589 _RS04590 ABID97_RS04595: ABID97_RS04595 - DNA polymerase III subunit delta, at 956,610 to 957,683 _RS04595
Group Condition ABID97_RS04575 ABID97_RS04580 ABID97_RS04585 ABID97_RS04590 ABID97_RS04595
carbon source L-Alanine (C) -0.4 -0.5 N.D. N.D. N.D.
carbon source L-Glutamine (C) +0.1 -0.8 N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.1 -0.7 N.D. N.D. N.D.
carbon source propionate (C) +0.1 -0.7 N.D. N.D. N.D.
carbon source Formate (C) +0.0 -0.6 N.D. N.D. N.D.
carbon source L-Proline (C) -0.2 -0.4 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.2 -0.4 N.D. N.D. N.D.
carbon source D-Glucuronic Acid (C) +0.2 -0.7 N.D. N.D. N.D.
carbon source Ethanol (C) +0.1 -0.6 N.D. N.D. N.D.
carbon source D-Ribose (C) +0.2 -0.6 N.D. N.D. N.D.
carbon source Ethanol (C) +0.2 -0.4 N.D. N.D. N.D.
carbon source L-tyrosine (C) -0.3 +0.4 N.D. N.D. N.D.
phage V1_10 -0.2 +0.4 N.D. N.D. N.D.
carbon source D,L-Lactate (C) -0.2 +0.4 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) -0.2 +0.5 N.D. N.D. N.D.
phage V2_10 -0.1 +0.5 N.D. N.D. N.D.
phage V2_1 +0.2 +0.3 N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) +0.3 +0.3 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control +0.1 +0.5 N.D. N.D. N.D.
carbon source Adenine (C) -0.1 +0.7 N.D. N.D. N.D.
carbon source L-Phenylalanine (C) +0.0 +0.6 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.8 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.6 N.D. N.D. N.D.
carbon source L-Alanine (C) +0.0 +0.7 N.D. N.D. N.D.
carbon source Adenine (C) -0.0 +0.7 N.D. N.D. N.D.
carbon source D-Glucose (C) +0.1 +0.6 N.D. N.D. N.D.
carbon source L-Histidine (C) +0.1 +0.7 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.6 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.7 N.D. N.D. N.D.
carbon source D-Serine (C) +0.0 +1.0 N.D. N.D. N.D.
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