Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 111 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ABID97_RS04540 and ABID97_RS04545 are separated by 40 nucleotides
ABID97_RS04545 and ABID97_RS04550 are separated by 4 nucleotides
ABID97_RS04550 and ABID97_RS04555 are separated by 5 nucleotides
ABID97_RS04555 and ABID97_RS04560 are separated by 146 nucleotides
ABID97_RS04540: ABID97_RS04540 - glucose-1-phosphate adenylyltransferase, at 941,143 to 942,447
_RS04540
ABID97_RS04545: ABID97_RS04545 - glycogen debranching protein GlgX, at 942,488 to 944,611
_RS04545
ABID97_RS04550: ABID97_RS04550 - 1,4-alpha-glucan branching protein GlgB, at 944,616 to 946,787
_RS04550
ABID97_RS04555: ABID97_RS04555 - alpha-amylase family glycosyl hydrolase, at 946,793 to 948,482
_RS04555
ABID97_RS04560: ABID97_RS04560 - NAD(P)/FAD-dependent oxidoreductase, at 948,629 to 950,107
_RS04560
Group
Condition
ABID97
_RS04540
ABID97
_RS04545
ABID97
_RS04550
ABID97
_RS04555
ABID97
_RS04560
phage
V2_100
-0.3
+0.1
+0.2
+0.1
-0.4
carbon source
propionate (C)
-0.4
+0.1
-0.2
+0.2
-0.1
carbon source
L-Alanine (C)
-0.4
+0.1
-0.3
+0.1
+0.2
carbon source
L-Histidine (C)
-0.1
-0.0
-0.2
-0.2
+0.7
carbon source
L-Malic (C)
-0.2
+0.1
-0.2
+0.2
+0.4
carbon source
a-Ketoglutaric (C)
-0.3
-0.1
-0.0
+0.2
+0.4
plant outgrowth control
Plant outgrowth control
-0.1
+0.4
-0.2
+0.2
+0.2
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.1
-0.1
+0.2
+0.5
carbon source
D-Arabinose (C)
-0.1
+0.2
-0.3
+0.2
+0.6
carbon source
D-Xylose (C)
+0.3
-0.1
-0.2
+0.1
+0.4
carbon source
L-Proline (C)
-0.0
+0.1
-0.2
+0.2
+0.5
carbon source
D-Ribose (C)
+0.3
+0.1
-0.1
+0.2
+0.2
carbon source
propionate (C)
-0.0
+0.4
-0.2
+0.5
+0.1
carbon source
D-Gluconic Acid (C)
+0.2
+0.1
-0.2
+0.2
+0.5
carbon source
Glucuronamide (C)
+0.0
+0.2
-0.1
+0.1
+0.6
carbon source
D-Mannose (C)
-0.0
+0.0
-0.2
+0.5
+0.4
carbon source
D-Gluconic Acid (C)
+0.3
+0.1
-0.2
+0.2
+0.5
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.3
-0.2
+0.3
+0.5
carbon source
D-Lactate (C)
-0.0
+0.3
-0.0
+0.2
+0.4
carbon source
D-Glucose (C)
+0.4
+0.1
-0.2
+0.2
+0.3
carbon source
D-Xylose (C)
+0.2
+0.2
-0.1
+0.4
+0.3
carbon source
Gly-Glu (C)
-0.0
+0.3
-0.1
+0.3
+0.6
carbon source
D-Mannose (C)
+0.1
+0.2
-0.2
+0.6
+0.3
carbon source
Glucuronamide (C)
+0.1
+0.1
-0.0
+0.0
+0.9
carbon source
D-Glucuronic Acid (C)
+0.1
+0.1
-0.1
+0.4
+0.7
carbon source
D-Arabinose (C)
-0.1
+0.4
-0.2
+0.4
+0.7
carbon source
D-Glucose (C)
+0.6
+0.1
-0.1
+0.2
+0.5
carbon source
Gly-Glu (C)
+0.1
+0.4
-0.1
+0.3
+0.6
carbon source
butyrate (C)
+0.8
+0.8
+0.1
+1.0
+1.6
carbon source
butyrate (C)
+0.8
+1.0
+0.2
+0.9
+1.4
remove
ABID97_RS04540
plot
remove
ABID97_RS04545
plot
remove
ABID97_RS04550
remove
ABID97_RS04555
plot
remove
ABID97_RS04560
plot