Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04525 and ABID97_RS04530 are separated by 43 nucleotidesABID97_RS04530 and ABID97_RS04535 are separated by 42 nucleotidesABID97_RS04535 and ABID97_RS04540 are separated by 17 nucleotidesABID97_RS04540 and ABID97_RS04545 are separated by 40 nucleotides ABID97_RS04525: ABID97_RS04525 - biopolymer transporter ExbD, at 936,601 to 937,071 _RS04525 ABID97_RS04530: ABID97_RS04530 - glycogen/starch/alpha-glucan phosphorylase, at 937,115 to 939,598 _RS04530 ABID97_RS04535: ABID97_RS04535 - glycogen synthase GlgA, at 939,641 to 941,125 _RS04535 ABID97_RS04540: ABID97_RS04540 - glucose-1-phosphate adenylyltransferase, at 941,143 to 942,447 _RS04540 ABID97_RS04545: ABID97_RS04545 - glycogen debranching protein GlgX, at 942,488 to 944,611 _RS04545
Group Condition ABID97_RS04525 ABID97_RS04530 ABID97_RS04535 ABID97_RS04540 ABID97_RS04545
carbon source L-Phenylalanine (C) -0.5 -0.4 -0.2 +0.1 -0.1
carbon source Adenine (C) -0.4 -0.3 -0.3 -0.0 +0.1
carbon source propionate (C) -0.7 -0.1 +0.1 -0.4 +0.1
carbon source a-Ketoglutaric (C) -0.3 -0.3 -0.0 -0.2 -0.1
carbon source D-Arabinose (C) -1.1 -0.0 -0.1 -0.1 +0.4
carbon source D-Arabinose (C) -0.6 -0.1 -0.2 -0.1 +0.2
carbon source D-Serine (C) -0.6 +0.0 -0.1 -0.2 +0.2
carbon source a-Ketoglutaric (C) +0.1 -0.3 -0.1 -0.3 -0.1
carbon source L-Alanine (C) -0.3 +0.1 -0.1 -0.4 +0.1
carbon source Formate (C) -0.6 -0.3 +0.2 -0.1 +0.1
carbon source L-Tryptophan (C) -0.1 -0.1 -0.1 -0.3 +0.2
phage V2_100 -0.4 -0.1 +0.2 -0.3 +0.1
r2a outgrowth control R2A outgrowth control -0.3 -0.0 -0.1 -0.2 +0.2
carbon source L-Asparagine (C) -0.0 -0.3 -0.2 -0.2 +0.2
plant outgrowth control Plant outgrowth control -0.1 -0.2 -0.3 -0.2 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.0 -0.0 -0.1 +0.3
carbon source Gly-Glu (C) -0.3 -0.3 -0.1 -0.0 +0.3
carbon source D-Mannose (C) +0.2 -0.5 -0.3 +0.1 +0.2
carbon source acetate (C) +0.2 -0.1 -0.4 -0.1 +0.1
carbon source propionate (C) -0.7 +0.2 +0.0 -0.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.0 +0.1 -0.1 +0.3
carbon source D-Glucose (C) -0.4 -0.1 -0.0 +0.4 +0.1
carbon source D-Ribose (C) +0.1 -0.3 -0.1 +0.3 +0.1
carbon source D-Glucose (C) -0.2 -0.2 +0.1 +0.6 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.4 -0.0 +0.1 +0.2
carbon source Glucuronamide (C) +0.3 -0.2 +0.2 +0.1 +0.1
r2a outgrowth control R2A outgrowth control +0.2 -0.1 +0.3 +0.0 +0.4
carbon source casaminos (C) +0.5 +0.1 -0.0 +0.0 +0.2
carbon source butyrate (C) -1.1 -0.4 +1.0 +0.8 +1.0
carbon source butyrate (C) -0.3 -0.5 +1.0 +0.8 +0.8
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