Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04515 and ABID97_RS04520 are separated by 10 nucleotidesABID97_RS04520 and ABID97_RS04525 are separated by 20 nucleotidesABID97_RS04525 and ABID97_RS04530 are separated by 43 nucleotidesABID97_RS04530 and ABID97_RS04535 are separated by 42 nucleotides ABID97_RS04515: ABID97_RS04515 - 4-hydroxy-tetrahydrodipicolinate reductase, at 935,062 to 935,862 _RS04515 ABID97_RS04520: ABID97_RS04520 - MotA/TolQ/ExbB proton channel family protein, at 935,873 to 936,580 _RS04520 ABID97_RS04525: ABID97_RS04525 - biopolymer transporter ExbD, at 936,601 to 937,071 _RS04525 ABID97_RS04530: ABID97_RS04530 - glycogen/starch/alpha-glucan phosphorylase, at 937,115 to 939,598 _RS04530 ABID97_RS04535: ABID97_RS04535 - glycogen synthase GlgA, at 939,641 to 941,125 _RS04535
Group Condition ABID97_RS04515 ABID97_RS04520 ABID97_RS04525 ABID97_RS04530 ABID97_RS04535
carbon source D-Arabinose (C) N.D. -0.7 -1.1 -0.0 -0.1
carbon source Gly-Glu (C) N.D. -1.1 -0.3 -0.3 -0.1
carbon source D-Arabinose (C) N.D. -0.7 -0.6 -0.1 -0.2
carbon source L-Alanine (C) N.D. -1.2 -0.4 -0.1 +0.1
carbon source L-Phenylalanine (C) N.D. -0.5 -0.5 -0.4 -0.2
carbon source Adenine (C) N.D. -0.9 -0.0 -0.2 -0.3
phage V2_100 N.D. -1.1 -0.4 -0.1 +0.2
carbon source L-Fucose (C) N.D. -1.0 -0.3 +0.1 -0.1
carbon source butyrate (C) N.D. -0.9 -1.1 -0.4 +1.0
carbon source D-Gluconic Acid (C) N.D. -0.8 -0.1 -0.2 -0.2
carbon source D-Glucose (C) N.D. -0.7 -0.4 -0.1 -0.0
carbon source D-Gluconic Acid (C) N.D. -0.7 -0.1 -0.2 -0.0
carbon source L-Threonine (C) N.D. -0.5 -0.3 -0.1 -0.1
carbon source D-Serine (C) N.D. -0.3 -0.6 +0.0 -0.1
carbon source Formate (C) N.D. -0.3 -0.6 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.7 -0.4 -0.0 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.4 -0.3 -0.3 -0.0
carbon source D-Ribose (C) N.D. -0.6 +0.1 -0.3 -0.1
carbon source propionate (C) N.D. -0.4 -0.7 +0.2 +0.0
carbon source D-Glucose (C) N.D. -0.5 -0.2 -0.2 +0.1
carbon source propionate (C) N.D. -0.1 -0.7 -0.1 +0.1
phage V2_10 N.D. -0.9 -0.1 -0.0 +0.2
carbon source D-Mannose (C) N.D. -0.2 +0.2 -0.5 -0.3
carbon source acetate (C) N.D. -0.4 +0.2 -0.1 -0.4
carbon source Glucuronamide (C) N.D. -1.0 +0.3 -0.2 +0.2
carbon source Adenine (C) N.D. +0.4 -0.4 -0.3 -0.3
carbon source butyrate (C) N.D. -0.9 -0.3 -0.5 +1.0
carbon source L-Histidine (C) N.D. -0.6 +0.2 -0.2 +0.0
phage V2_1 N.D. -0.5 +0.3 -0.1 -0.0
r2a outgrowth control R2A outgrowth control N.D. -0.4 +0.2 -0.1 +0.3
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