Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04500 and ABID97_RS04505 are separated by 41 nucleotidesABID97_RS04505 and ABID97_RS04510 are separated by 87 nucleotidesABID97_RS04510 and ABID97_RS04515 are separated by 148 nucleotidesABID97_RS04515 and ABID97_RS04520 are separated by 10 nucleotides ABID97_RS04500: ABID97_RS04500 - HPr(Ser) kinase/phosphatase, at 932,842 to 933,801 _RS04500 ABID97_RS04505: ABID97_RS04505 - ferric iron uptake transcriptional regulator, at 933,843 to 934,262 _RS04505 ABID97_RS04510: ABID97_RS04510 - outer membrane protein assembly factor BamE, at 934,350 to 934,913 _RS04510 ABID97_RS04515: ABID97_RS04515 - 4-hydroxy-tetrahydrodipicolinate reductase, at 935,062 to 935,862 _RS04515 ABID97_RS04520: ABID97_RS04520 - MotA/TolQ/ExbB proton channel family protein, at 935,873 to 936,580 _RS04520
Group Condition ABID97_RS04500 ABID97_RS04505 ABID97_RS04510 ABID97_RS04515 ABID97_RS04520
carbon source 2-Deoxy-D-Ribose (C) -2.3 -3.5 N.D. N.D. -0.1
carbon source D-Sorbitol (C) -2.5 -2.8 N.D. N.D. -0.4
carbon source D-Galactose (C) -2.2 -3.2 N.D. N.D. -0.2
carbon source 2-Deoxy-D-Ribose (C) -2.4 -3.0 N.D. N.D. -0.2
carbon source acetate (C) -2.3 -2.8 N.D. N.D. -0.4
carbon source D-Gluconic Acid (C) -2.6 -2.0 N.D. N.D. -0.8
carbon source Fumarate (C) -2.5 -2.6 N.D. N.D. -0.3
carbon source casaminos (C) -2.8 -2.8 N.D. N.D. +0.1
carbon source succinate (C) -2.6 -2.7 N.D. N.D. -0.1
carbon source D-Mannose (C) -2.9 -2.1 N.D. N.D. -0.3
carbon source D,L-Lactate (C) -2.1 -3.1 N.D. N.D. -0.0
carbon source L-Lactate (C) -2.5 -2.6 N.D. N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 -3.2 N.D. N.D. +0.0
carbon source L-Leucine (C) -2.7 -2.2 N.D. N.D. -0.3
carbon source succinate (C) -2.3 -2.7 N.D. N.D. -0.1
carbon source L-Glutamine (C) -2.6 -1.9 N.D. N.D. -0.5
carbon source casaminos (C) -2.6 -2.2 N.D. N.D. -0.3
carbon source L-Glutamic (C) -2.2 -2.6 N.D. N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 -2.1 N.D. N.D. -0.7
carbon source D,L-Lactate (C) -2.7 -2.0 N.D. N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) -2.3 -2.4 N.D. N.D. -0.1
carbon source acetate (C) -2.3 -2.3 N.D. N.D. -0.1
carbon source Gly-Glu (C) -2.7 -1.0 N.D. N.D. -1.1
carbon source Adenine (C) -2.7 -1.0 N.D. N.D. -0.9
carbon source L-Histidine (C) -1.3 -3.0 N.D. N.D. -0.4
carbon source L-Arabinose (C) -2.1 -2.1 N.D. N.D. -0.4
carbon source Adenine (C) -1.9 -3.0 N.D. N.D. +0.4
carbon source L-tyrosine (C) -2.1 -2.4 N.D. N.D. +0.3
carbon source D,L-Malic Acid (C) -2.8 -1.6 N.D. N.D. +0.5
carbon source D-Lactate (C) -2.0 -2.2 N.D. N.D. +0.4
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