Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04485 and ABID97_RS04490 are separated by 318 nucleotidesABID97_RS04490 and ABID97_RS04495 are separated by 183 nucleotidesABID97_RS04495 and ABID97_RS04500 are separated by 80 nucleotidesABID97_RS04500 and ABID97_RS04505 are separated by 41 nucleotides ABID97_RS04485: ABID97_RS04485 - ATP-dependent helicase, at 929,345 to 931,462 _RS04485 ABID97_RS04490: ABID97_RS04490 - ribosome-associated translation inhibitor RaiA, at 931,781 to 932,110 _RS04490 ABID97_RS04495: ABID97_RS04495 - PTS sugar transporter subunit IIA, at 932,294 to 932,761 _RS04495 ABID97_RS04500: ABID97_RS04500 - HPr(Ser) kinase/phosphatase, at 932,842 to 933,801 _RS04500 ABID97_RS04505: ABID97_RS04505 - ferric iron uptake transcriptional regulator, at 933,843 to 934,262 _RS04505
Group Condition ABID97_RS04485 ABID97_RS04490 ABID97_RS04495 ABID97_RS04500 ABID97_RS04505
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.4 N.D. -2.0 -3.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.0 N.D. -2.3 -3.5
carbon source casaminos (C) -0.1 -0.1 N.D. -2.8 -2.8
carbon source D-Sorbitol (C) -0.0 -0.4 N.D. -2.5 -2.8
carbon source succinate (C) -0.0 -0.3 N.D. -2.6 -2.7
carbon source L-Lactate (C) -0.1 -0.3 N.D. -2.5 -2.6
carbon source acetate (C) -0.2 -0.1 N.D. -2.3 -2.8
carbon source D-Galactose (C) +0.0 -0.0 N.D. -2.2 -3.2
carbon source D,L-Lactate (C) -0.1 +0.0 N.D. -2.1 -3.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.1 N.D. -2.4 -3.0
carbon source D-Gluconic Acid (C) -0.2 -0.3 N.D. -2.6 -2.0
carbon source Fumarate (C) +0.1 -0.1 N.D. -2.5 -2.6
carbon source L-Leucine (C) -0.1 -0.2 N.D. -2.7 -2.2
carbon source succinate (C) +0.0 -0.1 N.D. -2.3 -2.7
carbon source casaminos (C) -0.0 -0.3 N.D. -2.6 -2.2
carbon source acetate (C) -0.2 -0.1 N.D. -2.3 -2.3
carbon source D-Mannose (C) +0.0 +0.1 N.D. -2.9 -2.1
carbon source L-Glutamic (C) -0.1 -0.4 N.D. -2.1 -2.3
carbon source L-Histidine (C) +0.2 -0.9 N.D. -1.3 -3.0
carbon source D,L-Lactate (C) -0.0 -0.1 N.D. -2.7 -2.0
carbon source L-Glutamic (C) -0.0 +0.0 N.D. -2.2 -2.6
carbon source Adenine (C) -0.0 +0.1 N.D. -1.9 -3.0
carbon source L-tyrosine (C) +0.0 -0.2 N.D. -2.1 -2.4
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.1 N.D. -2.3 -2.4
carbon source L-Malic (C) -0.1 -0.1 N.D. -2.7 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.4 N.D. -2.2 -2.1
carbon source L-Glutamine (C) +0.1 -0.0 N.D. -2.6 -1.9
carbon source D,L-Malic Acid (C) +0.0 -0.1 N.D. -2.8 -1.6
carbon source L-Arabinose (C) +0.0 -0.2 N.D. -2.1 -2.1
carbon source Gly-Glu (C) +0.1 -0.3 N.D. -2.6 -1.6
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ABID97_RS04485
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ABID97_RS04490
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