Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS04420 and ABID97_RS04425 are separated by 169 nucleotidesABID97_RS04425 and ABID97_RS04430 are separated by 352 nucleotidesABID97_RS04430 and ABID97_RS04435 are separated by 39 nucleotidesABID97_RS04435 and ABID97_RS04440 overlap by 4 nucleotides ABID97_RS04420: ABID97_RS04420 - NUDIX hydrolase, at 915,256 to 915,738 _RS04420 ABID97_RS04425: ABID97_RS04425 - response regulator transcription factor, at 915,908 to 916,603 _RS04425 ABID97_RS04430: ABID97_RS04430 - Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha, at 916,956 to 918,086 _RS04430 ABID97_RS04435: ABID97_RS04435 - NAD(P) transhydrogenase subunit alpha, at 918,126 to 918,458 _RS04435 ABID97_RS04440: ABID97_RS04440 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 918,455 to 919,882 _RS04440
Group Condition ABID97_RS04420 ABID97_RS04425 ABID97_RS04430 ABID97_RS04435 ABID97_RS04440
carbon source L-Tryptophan (C) -0.1 -0.4 N.D. N.D. -3.0
carbon source L-Glutamine (C) -0.1 -0.5 N.D. N.D. -2.6
carbon source L-Glutamine (C) -0.0 -0.5 N.D. N.D. -2.2
carbon source L-Glutamic (C) -0.0 -0.5 N.D. N.D. -2.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.3 N.D. N.D. -2.2
carbon source L-Glutamic (C) +0.0 -0.3 N.D. N.D. -2.2
carbon source L-Tryptophan (C) -0.1 -0.4 N.D. N.D. -1.9
carbon source 2-Deoxy-D-Ribose (C) +0.3 -0.4 N.D. N.D. -1.7
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.3 N.D. N.D. -1.3
carbon source L-Leucine (C) +0.0 -0.4 N.D. N.D. -1.2
carbon source Tween 20 (C) -0.3 -0.5 N.D. N.D. -0.5
carbon source L-Leucine (C) -0.1 -0.4 N.D. N.D. -0.8
carbon source a-Ketoglutaric (C) -0.1 -0.5 N.D. N.D. -0.6
carbon source L-tyrosine (C) -0.2 -0.1 N.D. N.D. -0.9
carbon source D-Serine (C) -0.3 -0.5 N.D. N.D. -0.3
carbon source Adenine (C) -0.1 -0.4 N.D. N.D. -0.6
carbon source D-Arabinose (C) -0.1 -0.5 N.D. N.D. -0.5
carbon source D,L-Lactate (C) -0.2 -0.4 N.D. N.D. -0.4
carbon source D,L-Lactate (C) -0.1 -0.3 N.D. N.D. -0.6
carbon source Glycerol (C) +0.0 -0.3 N.D. N.D. -0.8
carbon source D,L-Malic Acid (C) -0.2 -0.5 N.D. N.D. -0.2
carbon source pyruvate (C) -0.0 -0.3 N.D. N.D. -0.6
carbon source D-Lactate (C) -0.1 -0.3 N.D. N.D. -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 N.D. N.D. -0.8
carbon source Formate (C) +0.1 +0.2 N.D. N.D. -0.8
carbon source L-Alanine (C) +0.1 -0.7 N.D. N.D. +0.2
phage V2_100 -0.0 +0.4 N.D. N.D. -0.7
carbon source L-tyrosine (C) +0.1 -0.9 N.D. N.D. +0.5
carbon source butyrate (C) +0.2 +0.7 N.D. N.D. +0.9
carbon source butyrate (C) -0.1 +1.0 N.D. N.D. +1.1
remove
ABID97_RS04420
plot		 remove
ABID97_RS04425
plot		 remove
ABID97_RS04430		 remove
ABID97_RS04435
plot		 remove
ABID97_RS04440
plot