Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04060 and ABID97_RS04065 are separated by 9 nucleotidesABID97_RS04065 and ABID97_RS04070 are separated by 267 nucleotidesABID97_RS04070 and ABID97_RS04075 are separated by 97 nucleotidesABID97_RS04075 and ABID97_RS04080 overlap by 4 nucleotides ABID97_RS04060: ABID97_RS04060 - IclR family transcriptional regulator, at 832,814 to 833,672 _RS04060 ABID97_RS04065: ABID97_RS04065 - hypothetical protein, at 833,682 to 834,182 _RS04065 ABID97_RS04070: ABID97_RS04070 - aldehyde dehydrogenase family protein, at 834,450 to 835,988 _RS04070 ABID97_RS04075: ABID97_RS04075 - amino acid ABC transporter substrate-binding protein, at 836,086 to 836,988 _RS04075 ABID97_RS04080: ABID97_RS04080 - pyridoxal phosphate-dependent aminotransferase, at 836,985 to 838,229 _RS04080
Group Condition ABID97_RS04060 ABID97_RS04065 ABID97_RS04070 ABID97_RS04075 ABID97_RS04080
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. -0.3 -0.3 -0.2
carbon source butyrate (C) -0.4 N.D. -0.1 -0.0 -0.2
carbon source Formate (C) +0.0 N.D. -0.2 -0.1 -0.4
phage V2_10 -0.3 N.D. -0.2 +0.1 -0.1
carbon source L-Lactate (C) -0.2 N.D. -0.0 -0.1 -0.2
carbon source butyrate (C) -0.1 N.D. -0.0 +0.0 -0.5
carbon source D-Xylose (C) -0.3 N.D. -0.1 -0.0 -0.2
carbon source L-Asparagine (C) +0.1 N.D. -0.2 +0.0 -0.3
carbon source Formate (C) +0.1 N.D. +0.1 -0.2 -0.3
carbon source L-Arabinose (C) +0.2 N.D. -0.4 -0.1 +0.1
carbon source L-Fucose (C) -0.2 N.D. +0.2 -0.2 +0.1
carbon source L-Phenylalanine (C) -0.2 N.D. -0.2 +0.2 +0.2
carbon source D-Glucose (C) -0.1 N.D. +0.2 +0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. +0.3 +0.1 -0.4
phage V2_100 +0.1 N.D. +0.1 -0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. +0.3 -0.1 -0.2
carbon source L-Threonine (C) +0.0 N.D. +0.1 +0.2 -0.3
carbon source D,L-Malic Acid (C) -0.2 N.D. -0.1 +0.2 +0.2
carbon source Adenine (C) -0.3 N.D. +0.2 +0.1 +0.1
carbon source propionate (C) -0.2 N.D. +0.1 +0.0 +0.2
carbon source Tween 20 (C) +0.4 N.D. +0.0 -0.1 -0.2
r2a outgrowth control R2A outgrowth control +0.2 N.D. +0.2 +0.0 -0.3
carbon source Glucuronamide (C) +0.1 N.D. +0.2 -0.2 +0.1
plant outgrowth control Plant outgrowth control -0.1 N.D. +0.3 +0.1 +0.1
carbon source Fumarate (C) -0.1 N.D. +0.4 +0.2 -0.1
carbon source Fumarate (C) +0.2 N.D. +0.3 -0.0 +0.1
carbon source L-Phenylalanine (C) +0.2 N.D. +0.2 +0.1 +0.1
carbon source Gly-Glu (C) -0.1 N.D. +0.6 +0.1 +0.1
carbon source a-Ketoglutaric (C) -0.2 N.D. +0.9 -0.0 -0.1
carbon source L-Histidine (C) +0.4 N.D. +0.0 +0.2 +0.0
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