Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04035 and ABID97_RS04040 overlap by 4 nucleotidesABID97_RS04040 and ABID97_RS04045 are separated by 0 nucleotidesABID97_RS04045 and ABID97_RS04050 are separated by 91 nucleotidesABID97_RS04050 and ABID97_RS04055 are separated by 73 nucleotides ABID97_RS04035: ABID97_RS04035 - NAD(P)/FAD-dependent oxidoreductase, at 827,980 to 829,398 _RS04035 ABID97_RS04040: ABID97_RS04040 - (2Fe-2S)-binding protein, at 829,395 to 829,700 _RS04040 ABID97_RS04045: ABID97_RS04045 - ABC transporter permease, at 829,701 to 830,495 _RS04045 ABID97_RS04050: ABID97_RS04050 - ABC transporter permease, at 830,587 to 831,447 _RS04050 ABID97_RS04055: ABID97_RS04055 - ABC transporter ATP-binding protein, at 831,521 to 832,609 _RS04055
Group Condition ABID97_RS04035 ABID97_RS04040 ABID97_RS04045 ABID97_RS04050 ABID97_RS04055
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.7 N.D. -0.1 +0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.0 N.D. +0.0 -0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 N.D. +0.0 +0.1 +0.0
r2a outgrowth control R2A outgrowth control -1.1 N.D. -0.1 +0.0 -0.3
plant outgrowth control Plant outgrowth control -1.0 N.D. -0.1 -0.2 -0.0
r2a outgrowth control R2A outgrowth control -1.3 N.D. +0.1 +0.0 -0.1
carbon source L-Alanine (C) -0.4 N.D. -0.3 -0.6 +0.1
plant outgrowth control Plant outgrowth control -1.1 N.D. -0.1 -0.1 +0.1
r2a outgrowth control R2A outgrowth control -1.2 N.D. +0.1 -0.0 +0.1
carbon source L-Arabinose (C) -0.5 N.D. -0.1 -0.1 -0.4
carbon source Formate (C) -0.5 N.D. -0.3 -0.3 +0.2
carbon source L-Malic (C) -0.5 N.D. -0.2 -0.2 -0.0
carbon source Ethanol (C) -0.4 N.D. -0.2 -0.4 +0.1
r2a outgrowth control R2A outgrowth control -1.0 N.D. +0.2 -0.1 +0.1
carbon source acetate (C) -0.5 N.D. -0.2 -0.3 +0.1
carbon source L-Glutamine (C) -0.2 N.D. -0.4 +0.1 -0.2
carbon source D-Glucose (C) -0.3 N.D. -0.2 -0.4 +0.1
carbon source D-Xylose (C) -0.3 N.D. -0.3 -0.1 +0.2
carbon source D,L-Malic Acid (C) +0.4 N.D. -0.1 -0.5 -0.1
carbon source L-Fucose (C) -0.6 N.D. +0.0 +0.2 +0.1
phage V2_1 -0.6 N.D. +0.1 +0.2 +0.0
carbon source D-Galactose (C) -0.5 N.D. -0.1 +0.0 +0.3
phage V1_1 -0.6 N.D. +0.1 +0.4 -0.1
carbon source propionate (C) -0.1 N.D. -0.3 +0.3 -0.2
carbon source Tween 20 (C) -0.4 N.D. +0.1 +0.3 +0.1
carbon source D,L-Malic Acid (C) +0.5 N.D. -0.4 -0.1 +0.2
carbon source L-Histidine (C) +1.2 N.D. -0.2 -0.5 -0.3
carbon source L-Histidine (C) +1.3 N.D. -0.3 -0.4 -0.2
carbon source L-Phenylalanine (C) -0.4 N.D. +0.0 +0.4 +0.2
phage V2_100 -0.4 N.D. +0.4 -0.2 +0.8
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