Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS04000 and ABID97_RS04005 are separated by 14 nucleotidesABID97_RS04005 and ABID97_RS04010 overlap by 4 nucleotidesABID97_RS04010 and ABID97_RS04015 are separated by 148 nucleotidesABID97_RS04015 and ABID97_RS04020 are separated by 138 nucleotides ABID97_RS04000: ABID97_RS04000 - MlaD family protein, at 819,842 to 820,813 _RS04000 ABID97_RS04005: ABID97_RS04005 - ATP-binding cassette domain-containing protein, at 820,828 to 821,640 _RS04005 ABID97_RS04010: ABID97_RS04010 - ABC transporter permease, at 821,637 to 822,803 _RS04010 ABID97_RS04015: ABID97_RS04015 - LysR family transcriptional regulator, at 822,952 to 823,878 _RS04015 ABID97_RS04020: ABID97_RS04020 - GMC family oxidoreductase N-terminal domain-containing protein, at 824,017 to 825,648 _RS04020
Group Condition ABID97_RS04000 ABID97_RS04005 ABID97_RS04010 ABID97_RS04015 ABID97_RS04020
carbon source L-tyrosine (C) +0.6 +0.0 +0.9 N.D. -1.1
carbon source 2-Deoxy-D-Ribose (C) +0.9 +0.5 +1.0 N.D. -1.2
carbon source 2-Deoxy-D-Ribose (C) +0.8 +1.2 +0.8 N.D. -1.2
carbon source Glycolic Acid (C) +0.7 +1.0 +0.7 N.D. -0.6
carbon source Glycolic Acid (C) +0.9 +0.7 +0.8 N.D. -0.5
carbon source L-Fucose (C) +1.5 -0.2 +1.0 N.D. -0.4
carbon source L-Threonine (C) +1.0 +0.5 +1.0 N.D. -0.7
carbon source L-Threonine (C) +1.6 +0.3 +1.0 N.D. -0.8
carbon source butyrate (C) +0.7 +1.0 +0.9 N.D. -0.4
carbon source D-Mannose (C) +0.7 +0.8 +1.0 N.D. -0.3
carbon source L-Arabinose (C) +0.7 +0.8 +1.1 N.D. -0.2
carbon source D-Lactate (C) +0.7 +0.9 +0.9 N.D. -0.2
carbon source Ethanol (C) +0.9 +1.2 +0.5 N.D. -0.2
carbon source L-Asparagine (C) +0.7 +0.9 +0.9 N.D. -0.1
carbon source butyrate (C) +0.8 +0.8 +1.1 N.D. -0.2
carbon source L-Arabinose (C) +1.0 +0.8 +0.8 N.D. -0.1
carbon source casaminos (C) +0.9 +0.8 +1.0 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.1 +0.8 N.D. -0.0
carbon source L-Lactate (C) +0.8 +1.2 +0.8 N.D. -0.2
carbon source L-Malic (C) +0.7 +1.1 +1.0 N.D. -0.2
carbon source succinate (C) +1.0 +0.9 +0.9 N.D. -0.1
carbon source L-Malic (C) +0.8 +1.0 +1.0 N.D. -0.1
carbon source L-Lactate (C) +0.8 +1.3 +0.9 N.D. -0.3
carbon source pyruvate (C) +0.9 +1.0 +0.9 N.D. +0.0
carbon source D-Serine (C) +0.8 +1.2 +0.8 N.D. -0.0
carbon source D,L-Malic Acid (C) +0.9 +0.9 +1.1 N.D. -0.1
carbon source Fumarate (C) +0.8 +1.3 +1.0 N.D. -0.0
carbon source L-Histidine (C) +1.1 +1.0 +1.2 N.D. -0.1
carbon source L-Histidine (C) +1.1 +1.0 +1.4 N.D. -0.3
carbon source a-Ketoglutaric (C) +2.7 +1.0 +0.8 N.D. -0.3
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