Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03760 and ABID97_RS03765 overlap by 4 nucleotidesABID97_RS03765 and ABID97_RS03770 are separated by 99 nucleotidesABID97_RS03770 and ABID97_RS03775 are separated by 53 nucleotidesABID97_RS03775 and ABID97_RS03780 are separated by 135 nucleotides ABID97_RS03760: ABID97_RS03760 - fumarylacetoacetate hydrolase family protein, at 772,052 to 772,693 _RS03760 ABID97_RS03765: ABID97_RS03765 - homoprotocatechuate degradation operon regulator HpaR, at 772,690 to 773,124 _RS03765 ABID97_RS03770: ABID97_RS03770 - DNA repair protein RadA, at 773,224 to 774,618 _RS03770 ABID97_RS03775: ABID97_RS03775 - hypothetical protein, at 774,672 to 775,127 _RS03775 ABID97_RS03780: ABID97_RS03780 - glycerate kinase, at 775,263 to 775,691 _RS03780
Group Condition ABID97_RS03760 ABID97_RS03765 ABID97_RS03770 ABID97_RS03775 ABID97_RS03780
phage V2_100 -0.8 -0.5 +0.2 -0.1 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.1 -0.1 -0.2 -0.9
plant outgrowth control Plant outgrowth control -0.3 -0.5 -0.1 +0.3 -0.9
carbon source D-Sorbitol (C) +0.2 -0.3 -0.7 -0.4 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.2 -0.3 -0.4 -0.3
carbon source D-Arabinose (C) +0.1 -0.1 -0.4 -0.6 +0.5
carbon source L-Histidine (C) -0.1 -0.2 -0.5 -0.2 +0.8
carbon source propionate (C) -0.2 -0.4 +0.4 -0.9 +0.8
carbon source Glucuronamide (C) -0.1 +0.4 +0.2 -0.8 +0.3
r2a outgrowth control R2A outgrowth control +0.3 -0.0 -0.5 -0.4 +0.5
carbon source acetate (C) +0.2 -0.2 -0.1 -0.5 +0.7
carbon source D-Glucuronic Acid (C) +0.3 +0.3 -0.9 -0.0 +0.5
carbon source pyruvate (C) +0.2 +0.3 -0.4 -0.5 +0.8
carbon source D-Mannose (C) +0.1 +0.6 -0.7 +0.3 +0.1
carbon source Glycerol (C) +0.3 +0.2 -0.3 -0.4 +0.7
carbon source D,L-Malic Acid (C) -0.6 -0.2 +0.2 +0.5 +0.7
carbon source D-Fructose (C) +0.4 -0.4 -0.2 +0.2 +0.7
carbon source L-Tryptophan (C) +0.0 -0.1 -0.5 +0.3 +0.9
carbon source butyrate (C) +0.6 +0.1 -0.5 +0.4 +0.2
carbon source L-Threonine (C) -0.2 -0.3 +0.3 +0.4 +0.6
carbon source D-Ribose (C) +0.3 +0.4 -0.3 -0.2 +0.7
carbon source L-Asparagine (C) +0.4 -0.3 -0.3 +0.6 +0.6
carbon source succinate (C) +0.1 -0.0 -0.3 +0.7 +0.6
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.4 -0.3 +0.3 +0.5
carbon source L-tyrosine (C) +0.2 +0.2 -0.2 +0.5 +0.7
carbon source a-Ketoglutaric (C) +0.0 -0.2 +0.3 +0.4 +1.0
carbon source a-Ketoglutaric (C) +0.4 +0.0 -0.4 +0.7 +0.8
carbon source L-tyrosine (C) +0.4 +0.2 +0.3 +0.4 +0.5
carbon source L-Arabinose (C) +1.7 +1.9 +0.8 +1.5 +0.1
carbon source L-Arabinose (C) +1.5 +1.9 +0.8 +1.3 +0.5
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ABID97_RS03765
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