Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03660 and ABID97_RS03665 are separated by 87 nucleotidesABID97_RS03665 and ABID97_RS03670 are separated by 10 nucleotidesABID97_RS03670 and ABID97_RS03675 are separated by 12 nucleotidesABID97_RS03675 and ABID97_RS03680 are separated by 75 nucleotides ABID97_RS03660: ABID97_RS03660 - glycolate oxidase subunit GlcF, at 753,805 to 755,037 _RS03660 ABID97_RS03665: ABID97_RS03665 - carboxypeptidase regulatory-like domain-containing protein, at 755,125 to 755,556 _RS03665 ABID97_RS03670: ABID97_RS03670 - glutathione peroxidase, at 755,567 to 756,055 _RS03670 ABID97_RS03675: ABID97_RS03675 - DMT family transporter, at 756,068 to 756,958 _RS03675 ABID97_RS03680: ABID97_RS03680 - lysophospholipid transporter LplT, at 757,034 to 758,338 _RS03680
Group Condition ABID97_RS03660 ABID97_RS03665 ABID97_RS03670 ABID97_RS03675 ABID97_RS03680
carbon source D-Lactate (C) -5.3 -0.2 +0.1 +0.0 -3.3
carbon source Glycolic Acid (C) -6.0 -0.1 +0.1 -0.1 -2.3
carbon source Glycolic Acid (C) -5.2 -0.0 +0.1 +0.0 -2.7
carbon source D-Gluconic Acid (C) -0.2 +0.2 -0.1 +0.2 -5.9
carbon source D,L-Lactate (C) -2.9 +0.0 +0.2 -0.1 -2.6
carbon source D,L-Lactate (C) -2.9 -0.1 +0.3 +0.0 -2.7
carbon source D-Gluconic Acid (C) -0.2 +0.1 -0.1 -0.1 -5.0
carbon source Gly-Glu (C) -0.1 +0.1 +0.1 +0.2 -5.4
carbon source Gly-Glu (C) -0.1 -0.2 +0.1 +0.1 -4.7
carbon source D-Glucuronic Acid (C) -0.2 -0.2 -0.2 -0.1 -3.9
carbon source succinate (C) -0.2 +0.1 +0.2 +0.0 -4.4
carbon source L-Lactate (C) -0.1 -0.4 +0.3 -0.3 -3.6
carbon source D,L-Malic Acid (C) +0.1 -0.2 -0.2 +0.1 -3.9
carbon source succinate (C) -0.1 +0.0 -0.0 +0.0 -3.6
carbon source D-Glucose (C) +0.0 +0.1 -0.0 +0.1 -3.9
carbon source butyrate (C) +0.1 -0.1 +0.3 -0.5 -3.4
carbon source L-Malic (C) +0.2 -0.1 -0.1 +0.1 -3.6
carbon source Tween 20 (C) -0.3 -0.3 -0.3 +0.2 -2.7
carbon source L-Lactate (C) +0.1 -0.1 +0.3 +0.0 -3.8
carbon source D-Arabinose (C) -0.3 -0.1 +0.2 +0.2 -3.4
carbon source D-Arabinose (C) -0.5 -0.1 +0.0 +0.1 -2.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.1 -0.4 -0.2 -2.4
carbon source Fumarate (C) +0.1 -0.1 +0.2 +0.1 -3.1
carbon source pyruvate (C) -0.2 +0.1 -0.0 +0.2 -2.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.0 +0.4 -0.0 -3.0
carbon source Glucuronamide (C) +0.1 -0.3 -0.1 +0.2 -2.6
carbon source Glucuronamide (C) -0.4 -0.6 +0.4 +0.0 -1.8
carbon source pyruvate (C) +0.1 +0.2 -0.1 +0.1 -2.7
carbon source butyrate (C) +0.2 +0.0 +0.5 -0.4 -2.1
phage V2_100 +0.3 +0.5 -0.1 -0.2 +5.3
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