Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03535 and ABID97_RS03540 overlap by 4 nucleotidesABID97_RS03540 and ABID97_RS03545 are separated by 48 nucleotidesABID97_RS03545 and ABID97_RS03550 are separated by 71 nucleotidesABID97_RS03550 and ABID97_RS03555 overlap by 23 nucleotides ABID97_RS03535: ABID97_RS03535 - ABC transporter ATP-binding protein, at 722,286 to 723,089 _RS03535 ABID97_RS03540: ABID97_RS03540 - ABC transporter ATP-binding protein, at 723,086 to 723,820 _RS03540 ABID97_RS03545: ABID97_RS03545 - bifunctional nicotinamidase/pyrazinamidase, at 723,869 to 724,591 _RS03545 ABID97_RS03550: ABID97_RS03550 - ABC transporter substrate-binding protein, at 724,663 to 725,823 _RS03550 ABID97_RS03555: ABID97_RS03555 - (2Fe-2S)-binding protein, at 725,801 to 726,301 _RS03555
Group Condition ABID97_RS03535 ABID97_RS03540 ABID97_RS03545 ABID97_RS03550 ABID97_RS03555
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.7 +0.1 -0.2 -2.2
carbon source L-tyrosine (C) N.D. +0.1 -1.1 -0.2 -1.2
carbon source Adenine (C) N.D. -1.8 -0.9 -0.2 +0.6
carbon source L-Arabinose (C) N.D. -0.4 +0.1 -0.3 -1.3
carbon source L-Proline (C) N.D. -0.2 -0.2 -0.1 -1.3
carbon source L-tyrosine (C) N.D. -0.1 -0.1 -0.2 -1.2
plant outgrowth control Plant outgrowth control N.D. -0.2 -0.1 -0.2 -1.0
plant outgrowth control Plant outgrowth control N.D. -0.1 +0.1 -0.0 -1.3
carbon source Adenine (C) N.D. -0.7 -0.6 -0.1 +0.1
carbon source D-Mannose (C) N.D. +0.0 -0.3 +0.2 -0.9
carbon source Formate (C) N.D. -0.0 +0.2 -0.3 -0.9
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.8 +0.2 -0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.4 -0.1 +0.1 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.2 -0.4 +0.7
phage V2_100 N.D. -0.1 -0.1 +0.7 -0.5
carbon source L-Arabinose (C) N.D. -0.4 +0.2 -0.3 +0.8
carbon source Fumarate (C) N.D. +0.4 -0.4 +0.1 +0.4
carbon source D-Serine (C) N.D. -0.3 -0.1 -0.2 +1.0
carbon source D,L-Malic Acid (C) N.D. -0.2 -0.1 -0.1 +0.9
carbon source L-Alanine (C) N.D. +0.4 +0.6 -0.1 -0.3
carbon source D,L-Malic Acid (C) N.D. +0.3 -0.8 +0.1 +1.0
carbon source Glycolic Acid (C) N.D. +0.5 +0.1 -0.4 +0.5
carbon source Fumarate (C) N.D. +0.3 +0.2 -0.1 +0.8
carbon source Ethanol (C) N.D. +0.3 -0.3 -0.0 +1.2
carbon source L-Alanine (C) N.D. +0.2 +0.1 -0.0 +1.0
carbon source D-Arabinose (C) N.D. +0.4 -0.0 +0.1 +0.9
carbon source D-Arabinose (C) N.D. +0.4 +0.6 +0.1 +0.4
carbon source D-Xylose (C) N.D. +0.7 -0.2 +0.1 +0.8
carbon source butyrate (C) N.D. +2.4 +1.2 +0.6 -0.5
carbon source butyrate (C) N.D. +2.5 +1.2 +0.7 +0.2
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ABID97_RS03535
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