Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03515 and ABID97_RS03520 are separated by 34 nucleotidesABID97_RS03520 and ABID97_RS03525 are separated by 73 nucleotidesABID97_RS03525 and ABID97_RS03530 are separated by 27 nucleotidesABID97_RS03530 and ABID97_RS03535 are separated by 709 nucleotides ABID97_RS03515: ABID97_RS03515 - amino acid synthesis family protein, at 717,087 to 717,728 _RS03515 ABID97_RS03520: ABID97_RS03520 - amino acid synthesis family protein, at 717,763 to 718,347 _RS03520 ABID97_RS03525: ABID97_RS03525 - ABC transporter substrate-binding protein, at 718,421 to 719,626 _RS03525 ABID97_RS03530: ABID97_RS03530 - ABC transporter permease, at 719,654 to 721,576 _RS03530 ABID97_RS03535: ABID97_RS03535 - ABC transporter ATP-binding protein, at 722,286 to 723,089 _RS03535
Group Condition ABID97_RS03515 ABID97_RS03520 ABID97_RS03525 ABID97_RS03530 ABID97_RS03535
carbon source Adenine (C) -0.1 N.D. -0.9 -0.9 N.D.
carbon source Glycolic Acid (C) -2.2 N.D. +0.3 +0.1 N.D.
carbon source Adenine (C) -0.1 N.D. -0.6 -0.8 N.D.
carbon source L-Histidine (C) -1.3 N.D. -0.2 +0.1 N.D.
carbon source L-Glutamic (C) -1.1 N.D. +0.0 -0.2 N.D.
carbon source L-Glutamic (C) -1.0 N.D. -0.1 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. -0.1 -0.4 N.D.
carbon source L-tyrosine (C) -0.5 N.D. -0.2 -0.2 N.D.
carbon source L-Glutamine (C) -0.7 N.D. -0.1 -0.1 N.D.
carbon source pyruvate (C) -0.7 N.D. -0.1 -0.1 N.D.
phage V2_100 -0.6 N.D. -0.0 -0.2 N.D.
carbon source L-Glutamine (C) -0.8 N.D. -0.0 +0.0 N.D.
carbon source L-Phenylalanine (C) -0.3 N.D. -0.2 -0.3 N.D.
plant outgrowth control Plant outgrowth control -0.6 N.D. -0.0 -0.2 N.D.
r2a outgrowth control R2A outgrowth control -0.8 N.D. +0.0 +0.1 N.D.
carbon source D-Fructose (C) -0.6 N.D. -0.0 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 N.D. -0.4 -0.0 N.D.
carbon source pyruvate (C) -0.6 N.D. +0.0 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 N.D. +0.1 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 N.D. +0.0 +0.0 N.D.
carbon source L-Histidine (C) -0.4 N.D. +0.1 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. +0.3 -0.4 N.D.
phage V1_10 -0.3 N.D. +0.4 -0.0 N.D.
carbon source Fumarate (C) -0.3 N.D. +0.2 +0.2 N.D.
carbon source Glucuronamide (C) -0.2 N.D. +0.7 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.6 N.D. -0.1 +0.1 N.D.
carbon source D-Serine (C) +0.2 N.D. +0.4 +0.2 N.D.
carbon source D-Xylose (C) +0.5 N.D. +0.1 +0.3 N.D.
carbon source butyrate (C) +0.1 N.D. +1.9 +1.8 N.D.
carbon source butyrate (C) +0.3 N.D. +2.0 +2.0 N.D.
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