Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03410 and ABID97_RS03415 are separated by 336 nucleotidesABID97_RS03415 and ABID97_RS03420 are separated by 60 nucleotidesABID97_RS03420 and ABID97_RS03425 are separated by 24 nucleotidesABID97_RS03425 and ABID97_RS03430 are separated by 29 nucleotides ABID97_RS03410: ABID97_RS03410 - ABC transporter ATP-binding protein, at 692,550 to 693,335 _RS03410 ABID97_RS03415: ABID97_RS03415 - histidine utilization repressor, at 693,672 to 694,409 _RS03415 ABID97_RS03420: ABID97_RS03420 - histidine ammonia-lyase, at 694,470 to 696,020 _RS03420 ABID97_RS03425: ABID97_RS03425 - urocanate hydratase, at 696,045 to 697,763 _RS03425 ABID97_RS03430: ABID97_RS03430 - HutD family protein, at 697,793 to 698,365 _RS03430
Group Condition ABID97_RS03410 ABID97_RS03415 ABID97_RS03420 ABID97_RS03425 ABID97_RS03430
carbon source L-Histidine (C) -5.8 +3.4 -5.3 -6.3 N.D.
carbon source L-Histidine (C) -4.8 +3.3 -3.8 -6.4 N.D.
carbon source D-Xylose (C) -0.1 -4.1 +0.0 -0.1 N.D.
carbon source L-Phenylalanine (C) -0.2 -3.5 -0.3 -0.2 N.D.
carbon source L-Threonine (C) -0.3 -2.4 -0.5 -0.7 N.D.
carbon source L-Phenylalanine (C) -0.0 -3.1 +0.3 -0.6 N.D.
carbon source D-Xylose (C) -0.1 -3.2 +0.0 -0.1 N.D.
carbon source L-Threonine (C) +0.2 -3.1 +0.0 -0.3 N.D.
carbon source Glycerol (C) -0.3 -1.8 -0.1 -0.3 N.D.
carbon source casaminos (C) -0.3 -0.8 -0.5 -0.8 N.D.
carbon source D-Glucose (C) -0.4 -1.3 -0.1 -0.6 N.D.
carbon source Glycerol (C) +0.4 -2.0 -0.6 -0.1 N.D.
carbon source L-Leucine (C) +0.3 -2.3 -0.0 -0.2 N.D.
carbon source L-Leucine (C) +0.2 -1.9 -0.3 -0.0 N.D.
carbon source Gly-Glu (C) -0.4 -1.3 +0.0 -0.3 N.D.
carbon source casaminos (C) +0.0 -1.2 -0.1 -0.7 N.D.
carbon source L-Arabinose (C) -0.4 -0.9 -0.4 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -1.2 -0.1 -0.6 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.8 -0.5 -0.2 N.D.
carbon source D-Galactose (C) -0.7 -0.2 -0.4 -0.3 N.D.
carbon source D,L-Malic Acid (C) -0.3 -1.4 +0.1 +0.1 N.D.
carbon source D-Arabinose (C) +0.3 -1.0 -0.4 -0.3 N.D.
carbon source D-Glucose (C) +0.4 -1.3 -0.4 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -1.3 +0.2 -0.2 N.D.
carbon source acetate (C) -0.4 +0.3 -0.8 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -1.5 -0.3 +0.1 N.D.
carbon source D-Ribose (C) -0.2 -0.9 +0.3 -0.2 N.D.
carbon source butyrate (C) -0.4 +0.9 -0.0 -0.3 N.D.
r2a outgrowth control R2A outgrowth control +0.7 +0.1 +0.1 -0.5 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.5 +0.4 +0.4 N.D.
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