Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS03335 and ABID97_RS03340 are separated by 41 nucleotidesABID97_RS03340 and ABID97_RS03345 are separated by 74 nucleotidesABID97_RS03345 and ABID97_RS03350 are separated by 8 nucleotidesABID97_RS03350 and ABID97_RS03355 are separated by 125 nucleotides ABID97_RS03335: ABID97_RS03335 - TetR/AcrR family transcriptional regulator, at 674,380 to 675,090 _RS03335 ABID97_RS03340: ABID97_RS03340 - nucleoside recognition domain-containing protein, at 675,132 to 676,361 _RS03340 ABID97_RS03345: ABID97_RS03345 - phospholipase D family protein, at 676,436 to 678,019 _RS03345 ABID97_RS03350: ABID97_RS03350 - metallophosphoesterase, at 678,028 to 678,834 _RS03350 ABID97_RS03355: ABID97_RS03355 - hypothetical protein, at 678,960 to 679,133 _RS03355
Group Condition ABID97_RS03335 ABID97_RS03340 ABID97_RS03345 ABID97_RS03350 ABID97_RS03355
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.5 -0.3 -0.3 N.D.
carbon source D-Glucose (C) -0.6 -0.2 -0.3 -0.2 N.D.
carbon source Gly-Glu (C) -0.5 -0.3 -0.1 -0.1 N.D.
phage V1_10 -0.4 -0.4 -0.1 -0.1 N.D.
carbon source L-Tryptophan (C) -0.3 -0.1 -0.2 -0.2 N.D.
carbon source L-Threonine (C) -0.3 -0.2 -0.1 -0.2 N.D.
phage V2_100 -0.3 -0.3 +0.1 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.3 +0.0 +0.1 N.D.
carbon source D-Glucuronic Acid (C) -0.4 -0.2 -0.1 -0.1 N.D.
carbon source D-Lactate (C) -0.1 -0.4 -0.1 -0.1 N.D.
phage V2_10 -0.4 -0.2 -0.1 -0.0 N.D.
carbon source Fumarate (C) -0.4 -0.2 +0.1 -0.1 N.D.
carbon source L-Phenylalanine (C) -0.3 -0.1 -0.2 -0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.9 +0.2 +0.1 N.D.
plant outgrowth control Plant outgrowth control -0.3 -0.2 +0.1 -0.0 N.D.
carbon source Tween 20 (C) -0.0 -0.6 +0.2 +0.0 N.D.
carbon source L-Asparagine (C) -0.2 -0.2 -0.1 +0.2 N.D.
carbon source Tween 20 (C) +0.2 -0.7 +0.1 +0.1 N.D.
carbon source L-Phenylalanine (C) -0.3 -0.2 +0.0 +0.2 N.D.
carbon source pyruvate (C) -0.4 +0.1 -0.1 +0.1 N.D.
carbon source L-Proline (C) -0.2 +0.0 +0.1 -0.2 N.D.
carbon source L-Glutamine (C) -0.3 +0.3 -0.1 -0.0 N.D.
carbon source L-Alanine (C) -0.0 +0.3 -0.2 -0.1 N.D.
carbon source butyrate (C) +0.3 -0.1 -0.2 -0.1 N.D.
control NP -0.3 +0.2 +0.2 -0.0 N.D.
carbon source L-Alanine (C) -0.3 +0.1 +0.2 +0.1 N.D.
carbon source Adenine (C) -0.2 +0.4 +0.2 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.1 +0.2 +0.1 N.D.
carbon source propionate (C) +0.2 +0.2 +0.3 -0.1 N.D.
carbon source D,L-Malic Acid (C) +0.3 +0.3 +0.0 +0.0 N.D.
remove
ABID97_RS03335
plot		 remove
ABID97_RS03340
plot		 remove
ABID97_RS03345		 remove
ABID97_RS03350
plot		 remove
ABID97_RS03355
plot