Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03315 and ABID97_RS03320 are separated by 228 nucleotidesABID97_RS03320 and ABID97_RS03325 are separated by 27 nucleotidesABID97_RS03325 and ABID97_RS03330 overlap by 4 nucleotidesABID97_RS03330 and ABID97_RS03335 overlap by 4 nucleotides ABID97_RS03315: ABID97_RS03315 - flavin reductase family protein, at 668,796 to 669,305 _RS03315 ABID97_RS03320: ABID97_RS03320 - tripartite tricarboxylate transporter substrate binding protein, at 669,534 to 670,526 _RS03320 ABID97_RS03325: ABID97_RS03325 - SDR family oxidoreductase, at 670,554 to 671,474 _RS03325 ABID97_RS03330: ABID97_RS03330 - AMP-binding protein, at 671,471 to 674,383 _RS03330 ABID97_RS03335: ABID97_RS03335 - TetR/AcrR family transcriptional regulator, at 674,380 to 675,090 _RS03335
Group Condition ABID97_RS03315 ABID97_RS03320 ABID97_RS03325 ABID97_RS03330 ABID97_RS03335
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 -0.6 -0.4 -0.2
carbon source D-Glucose (C) N.D. -0.3 -0.4 -0.3 -0.6
carbon source Gly-Glu (C) N.D. -0.3 -0.1 -0.3 -0.5
carbon source L-Tryptophan (C) N.D. -0.0 -0.4 -0.1 -0.3
phage V2_10 N.D. -0.2 -0.1 -0.1 -0.4
carbon source Fumarate (C) N.D. -0.0 -0.2 -0.1 -0.4
carbon source L-Phenylalanine (C) N.D. -0.1 -0.2 -0.0 -0.3
carbon source L-Proline (C) N.D. -0.2 -0.3 -0.1 -0.2
control NP N.D. -0.1 -0.1 -0.1 -0.3
carbon source D-Lactate (C) N.D. -0.1 -0.4 +0.0 -0.1
carbon source succinate (C) N.D. -0.1 -0.3 -0.1 -0.2
phage V1_10 N.D. +0.0 -0.2 +0.0 -0.4
carbon source L-Threonine (C) N.D. -0.0 -0.2 +0.2 -0.3
carbon source D-Glucose (C) N.D. -0.0 -0.2 +0.1 -0.2
phage V2_100 N.D. -0.3 +0.2 +0.2 -0.3
carbon source L-Phenylalanine (C) N.D. +0.1 -0.1 +0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 +0.2 +0.0 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.0 -0.5 +0.3 +0.1
carbon source D-Glucuronic Acid (C) N.D. +0.1 +0.0 +0.1 -0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.2 -0.1 +0.2 -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.1 +0.1 +0.2 -0.2
carbon source L-Glutamine (C) N.D. +0.3 -0.0 +0.2 -0.3
carbon source D-Xylose (C) N.D. +0.2 -0.0 +0.2 -0.2
carbon source propionate (C) N.D. +0.1 -0.3 +0.2 +0.2
carbon source casaminos (C) N.D. -0.1 -0.0 +0.1 +0.3
carbon source butyrate (C) N.D. -0.1 -0.1 +0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 +0.2 -0.0 +0.3
carbon source L-Histidine (C) N.D. +0.1 -0.1 +0.4 -0.0
carbon source L-Arabinose (C) N.D. +0.2 +0.3 +0.2 -0.2
carbon source L-Histidine (C) N.D. +0.1 +0.0 +0.3 +0.1
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