Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03260 and ABID97_RS03265 are separated by 22 nucleotidesABID97_RS03265 and ABID97_RS03270 are separated by 139 nucleotidesABID97_RS03270 and ABID97_RS03275 are separated by 0 nucleotidesABID97_RS03275 and ABID97_RS03280 overlap by 58 nucleotides ABID97_RS03260: ABID97_RS03260 - SDR family oxidoreductase, at 660,089 to 660,853 _RS03260 ABID97_RS03265: ABID97_RS03265 - dioxygenase, at 660,876 to 661,742 _RS03265 ABID97_RS03270: ABID97_RS03270 - LacI family DNA-binding transcriptional regulator, at 661,882 to 662,913 _RS03270 ABID97_RS03275: ABID97_RS03275 - hypothetical protein, at 662,914 to 663,429 _RS03275 ABID97_RS03280: ABID97_RS03280 - hypothetical protein, at 663,372 to 664,613 _RS03280
Group Condition ABID97_RS03260 ABID97_RS03265 ABID97_RS03270 ABID97_RS03275 ABID97_RS03280
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.0 -1.0 +0.3 -1.0
carbon source Formate (C) N.D. -0.7 -0.1 -1.1 -0.2
carbon source L-Phenylalanine (C) N.D. -0.1 -1.1 -0.5 -0.5
carbon source L-Histidine (C) N.D. -0.6 -0.6 -0.7 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.5 -0.4 +0.4 -0.3
carbon source L-Phenylalanine (C) N.D. -0.6 -1.0 -0.3 +0.1
carbon source D,L-Malic Acid (C) N.D. -0.7 -0.7 -0.7 +0.4
phage V2_10 N.D. -0.6 -0.7 -0.5 -0.0
carbon source D-Serine (C) N.D. -0.8 -0.2 -0.3 -0.4
carbon source Gly-Glu (C) N.D. -0.3 -0.6 -0.5 -0.3
carbon source L-Histidine (C) N.D. -1.0 -0.7 +0.2 +0.3
carbon source D,L-Malic Acid (C) N.D. -0.8 +0.2 -1.3 +0.7
carbon source L-Fucose (C) N.D. -0.7 +0.4 -0.4 -0.3
carbon source L-Proline (C) N.D. +0.0 +0.3 -0.6 -0.6
carbon source pyruvate (C) N.D. -0.5 +0.2 -0.8 +0.3
carbon source Glucuronamide (C) N.D. -0.6 +0.5 -0.1 -0.6
carbon source propionate (C) N.D. +0.4 +0.7 -1.2 -0.5
carbon source D-Fructose (C) N.D. +0.2 -0.8 -0.2 +0.5
carbon source L-Alanine (C) N.D. -0.8 -0.3 +0.7 +0.2
carbon source D-Glucose (C) N.D. -0.3 +0.2 -0.5 +0.5
carbon source butyrate (C) N.D. -0.9 +1.4 -0.0 -0.5
carbon source L-tyrosine (C) N.D. -0.6 +0.0 -0.3 +0.9
carbon source D-Arabinose (C) N.D. -0.6 +0.5 -0.5 +0.6
carbon source L-Leucine (C) N.D. +0.7 +0.2 -0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +1.1 -0.7 +0.3 -0.5
carbon source a-Ketoglutaric (C) N.D. +0.3 +0.9 -0.9 -0.2
carbon source a-Ketoglutaric (C) N.D. +0.2 +0.7 -0.4 -0.2
r2a outgrowth control R2A outgrowth control N.D. +0.9 +0.2 -0.2 -0.3
plant outgrowth control Plant outgrowth control N.D. +0.8 -0.4 +0.5 -0.2
carbon source butyrate (C) N.D. +0.2 +1.0 -0.3 +0.1
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ABID97_RS03260
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ABID97_RS03265
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