Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03230 and ABID97_RS03235 overlap by 55 nucleotidesABID97_RS03235 and ABID97_RS03240 are separated by 2 nucleotidesABID97_RS03240 and ABID97_RS03245 are separated by 57 nucleotidesABID97_RS03245 and ABID97_RS03250 are separated by 22 nucleotides ABID97_RS03230: ABID97_RS03230 - uracil-DNA glycosylase family protein, at 654,156 to 654,785 _RS03230 ABID97_RS03235: ABID97_RS03235 - amidohydrolase, at 654,731 to 656,404 _RS03235 ABID97_RS03240: ABID97_RS03240 - tripartite tricarboxylate transporter substrate binding protein, at 656,407 to 657,396 _RS03240 ABID97_RS03245: ABID97_RS03245 - cupin domain-containing protein, at 657,454 to 657,813 _RS03245 ABID97_RS03250: ABID97_RS03250 - zinc-binding alcohol dehydrogenase family protein, at 657,836 to 658,828 _RS03250
Group Condition ABID97_RS03230 ABID97_RS03235 ABID97_RS03240 ABID97_RS03245 ABID97_RS03250
carbon source L-Alanine (C) -0.7 +0.1 -0.2 N.D. +0.2
carbon source Fumarate (C) +0.1 -0.0 -0.5 N.D. +0.2
carbon source D-Galactose (C) -0.5 -0.0 -0.0 N.D. +0.3
carbon source Ethanol (C) -0.0 -0.0 -0.4 N.D. +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.6 +0.3 -0.1 N.D. +0.4
carbon source D-Glucuronic Acid (C) -0.2 +0.1 -0.1 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.2 -0.3 N.D. +0.0
carbon source L-Asparagine (C) -0.1 -0.0 -0.3 N.D. +0.4
carbon source D-Galactose (C) +0.2 -0.1 -0.3 N.D. +0.2
carbon source D-Gluconic Acid (C) +0.1 +0.1 -0.3 N.D. +0.3
carbon source L-Tryptophan (C) +0.2 +0.1 -0.4 N.D. +0.3
carbon source L-Glutamine (C) +0.1 -0.2 -0.1 N.D. +0.4
carbon source L-Phenylalanine (C) +0.4 +0.1 +0.0 N.D. -0.2
carbon source Formate (C) -0.0 +0.2 -0.2 N.D. +0.4
carbon source Tween 20 (C) -0.2 +0.1 +0.2 N.D. +0.2
carbon source Gly-Glu (C) +0.2 +0.1 -0.2 N.D. +0.3
carbon source D-Glucose (C) +0.3 +0.1 -0.1 N.D. +0.3
carbon source propionate (C) +0.1 -0.0 -0.1 N.D. +0.7
phage V1_1 +0.4 +0.1 +0.1 N.D. +0.1
carbon source L-Fucose (C) +0.4 +0.2 +0.0 N.D. +0.1
carbon source Adenine (C) +0.4 +0.1 +0.0 N.D. +0.1
carbon source D-Glucose (C) +0.3 +0.1 +0.1 N.D. +0.2
carbon source L-Arabinose (C) +0.4 +0.1 +0.2 N.D. +0.1
phage V1_10 +0.4 +0.0 +0.2 N.D. +0.2
carbon source D-Sorbitol (C) +0.1 +0.1 +0.1 N.D. +0.5
phage V2_10 +0.2 +0.1 +0.2 N.D. +0.3
phage V1_10 +0.4 +0.1 +0.2 N.D. +0.2
carbon source L-tyrosine (C) -0.1 +0.3 +0.3 N.D. +0.4
phage V2_10 +0.7 +0.1 +0.1 N.D. +0.3
phage V2_100 +1.4 +0.5 +0.3 N.D. +0.2
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ABID97_RS03230
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ABID97_RS03235
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ABID97_RS03245
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ABID97_RS03250
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