Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03200 and ABID97_RS03205 are separated by 185 nucleotidesABID97_RS03205 and ABID97_RS03210 are separated by 73 nucleotidesABID97_RS03210 and ABID97_RS03215 are separated by 16 nucleotidesABID97_RS03215 and ABID97_RS03220 overlap by 4 nucleotides ABID97_RS03200: ABID97_RS03200 - LysR substrate-binding domain-containing protein, at 648,680 to 649,600 _RS03200 ABID97_RS03205: ABID97_RS03205 - acyl-CoA dehydrogenase, at 649,786 to 650,985 _RS03205 ABID97_RS03210: ABID97_RS03210 - CaiB/BaiF CoA-transferase family protein, at 651,059 to 652,297 _RS03210 ABID97_RS03215: ABID97_RS03215 - VOC family protein, at 652,314 to 652,754 _RS03215 ABID97_RS03220: ABID97_RS03220 - CopD family protein, at 652,751 to 653,209 _RS03220
Group Condition ABID97_RS03200 ABID97_RS03205 ABID97_RS03210 ABID97_RS03215 ABID97_RS03220
carbon source L-Tryptophan (C) -0.2 -5.8 -0.1 -0.1 +0.0
carbon source L-Tryptophan (C) -0.1 -5.7 -0.0 +0.2 -0.0
carbon source L-Histidine (C) -0.1 -0.7 -0.4 -0.4 -0.1
carbon source butyrate (C) -0.0 -1.2 +0.2 -0.3 -0.2
carbon source succinate (C) -0.2 -0.7 -0.1 -0.4 -0.1
carbon source L-Leucine (C) -0.3 -0.7 -0.4 -0.2 -0.0
carbon source butyrate (C) -0.3 -1.1 -0.2 +0.2 +0.0
carbon source L-Glutamine (C) -0.4 -0.3 -0.4 -0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.9 -0.6 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.5 -0.5 -0.1 -0.1
carbon source D-Serine (C) -0.1 -0.4 -0.3 -0.2 -0.1
carbon source D-Xylose (C) -0.4 -0.1 -0.1 -0.4 -0.1
carbon source L-Alanine (C) -0.3 -0.1 -0.5 -0.1 -0.1
carbon source L-Histidine (C) -0.2 -0.6 -0.3 +0.2 -0.1
carbon source L-Malic (C) -0.1 -0.1 -0.4 -0.1 -0.2
carbon source Formate (C) -0.1 -0.4 -0.1 -0.1 -0.2
carbon source Adenine (C) -0.1 -0.5 -0.1 -0.2 -0.1
carbon source L-Threonine (C) -0.3 -0.2 -0.3 -0.2 +0.0
carbon source Glycolic Acid (C) -0.1 -0.4 -0.3 -0.1 +0.0
carbon source L-Alanine (C) +0.0 -0.2 -0.4 -0.2 -0.2
carbon source casaminos (C) +0.1 -0.5 -0.1 -0.3 -0.0
carbon source Tween 20 (C) -0.1 -0.4 -0.2 +0.1 -0.0
carbon source D-Sorbitol (C) -0.2 -0.3 +0.2 -0.3 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.8 +0.2 -0.4 +0.1
plant outgrowth control Plant outgrowth control -0.2 -0.6 -0.3 +0.4 +0.2
carbon source Formate (C) -0.1 -0.5 +0.1 +0.2 -0.1
carbon source D,L-Malic Acid (C) -0.2 -0.4 +0.2 -0.0 +0.1
phage V1_10 -0.2 +0.2 -0.3 +0.3 +0.0
carbon source a-Ketoglutaric (C) -0.0 -0.4 +0.1 +0.5 -0.2
phage V2_100 +0.3 +0.1 -0.4 +0.6 +0.1
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ABID97_RS03200
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