Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03195 and ABID97_RS03200 are separated by 62 nucleotidesABID97_RS03200 and ABID97_RS03205 are separated by 185 nucleotidesABID97_RS03205 and ABID97_RS03210 are separated by 73 nucleotidesABID97_RS03210 and ABID97_RS03215 are separated by 16 nucleotides ABID97_RS03195: ABID97_RS03195 - phage holin family protein, at 648,213 to 648,617 _RS03195 ABID97_RS03200: ABID97_RS03200 - LysR substrate-binding domain-containing protein, at 648,680 to 649,600 _RS03200 ABID97_RS03205: ABID97_RS03205 - acyl-CoA dehydrogenase, at 649,786 to 650,985 _RS03205 ABID97_RS03210: ABID97_RS03210 - CaiB/BaiF CoA-transferase family protein, at 651,059 to 652,297 _RS03210 ABID97_RS03215: ABID97_RS03215 - VOC family protein, at 652,314 to 652,754 _RS03215
Group Condition ABID97_RS03195 ABID97_RS03200 ABID97_RS03205 ABID97_RS03210 ABID97_RS03215
carbon source L-Tryptophan (C) N.D. -0.2 -5.8 -0.1 -0.1
carbon source L-Tryptophan (C) N.D. -0.1 -5.7 -0.0 +0.2
carbon source L-Histidine (C) N.D. -0.1 -0.7 -0.4 -0.4
carbon source L-Leucine (C) N.D. -0.3 -0.7 -0.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.2 -0.9 -0.6 +0.3
carbon source butyrate (C) N.D. -0.0 -1.2 +0.2 -0.3
carbon source succinate (C) N.D. -0.2 -0.7 -0.1 -0.4
carbon source butyrate (C) N.D. -0.3 -1.1 -0.2 +0.2
carbon source L-Glutamine (C) N.D. -0.4 -0.3 -0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 -0.5 -0.5 -0.1
carbon source D-Serine (C) N.D. -0.1 -0.4 -0.3 -0.2
carbon source L-Alanine (C) N.D. -0.3 -0.1 -0.5 -0.1
carbon source D-Xylose (C) N.D. -0.4 -0.1 -0.1 -0.4
carbon source L-Threonine (C) N.D. -0.3 -0.2 -0.3 -0.2
carbon source L-Histidine (C) N.D. -0.2 -0.6 -0.3 +0.2
carbon source Glycolic Acid (C) N.D. -0.1 -0.4 -0.3 -0.1
carbon source Adenine (C) N.D. -0.1 -0.5 -0.1 -0.2
carbon source D,L-Lactate (C) N.D. -0.1 -0.4 -0.0 -0.3
carbon source Adenine (C) N.D. -0.1 -0.5 -0.0 -0.1
carbon source casaminos (C) N.D. +0.1 -0.5 -0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 -0.8 +0.2 -0.4
plant outgrowth control Plant outgrowth control N.D. -0.2 -0.6 -0.3 +0.4
carbon source Tween 20 (C) N.D. -0.1 -0.4 -0.2 +0.1
carbon source D-Sorbitol (C) N.D. -0.2 -0.3 +0.2 -0.3
carbon source D,L-Malic Acid (C) N.D. -0.2 -0.4 +0.2 -0.0
carbon source Formate (C) N.D. -0.1 -0.5 +0.1 +0.2
phage V1_10 N.D. -0.2 +0.2 -0.3 +0.3
carbon source casaminos (C) N.D. +0.2 -0.4 +0.2 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.0 -0.4 +0.1 +0.5
phage V2_100 N.D. +0.3 +0.1 -0.4 +0.6
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