Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03170 and ABID97_RS03175 overlap by 4 nucleotidesABID97_RS03175 and ABID97_RS03180 are separated by 99 nucleotidesABID97_RS03180 and ABID97_RS03185 overlap by 19 nucleotidesABID97_RS03185 and ABID97_RS03190 are separated by 287 nucleotides ABID97_RS03170: ABID97_RS03170 - ABC transporter substrate-binding protein, at 641,566 to 642,510 _RS03170 ABID97_RS03175: ABID97_RS03175 - TetR/AcrR family transcriptional regulator, at 642,507 to 643,235 _RS03175 ABID97_RS03180: ABID97_RS03180 - acetoacetate--CoA ligase, at 643,335 to 645,341 _RS03180 ABID97_RS03185: ABID97_RS03185 - adenylate/guanylate cyclase domain-containing protein, at 645,323 to 647,140 _RS03185 ABID97_RS03190: ABID97_RS03190 - 2OG-Fe(II) oxygenase, at 647,428 to 648,144 _RS03190
Group Condition ABID97_RS03170 ABID97_RS03175 ABID97_RS03180 ABID97_RS03185 ABID97_RS03190
carbon source L-Asparagine (C) -0.2 -0.2 -0.1 -0.2 -0.3
carbon source L-Arabinose (C) -0.3 +0.1 +0.0 -0.2 -0.5
carbon source D-Xylose (C) -0.1 -0.1 +0.0 -0.1 -0.4
carbon source a-Ketoglutaric (C) -0.2 -0.2 +0.0 -0.2 -0.1
carbon source D-Gluconic Acid (C) -0.2 -0.3 +0.0 -0.2 +0.0
carbon source Glucuronamide (C) -0.3 +0.0 -0.1 +0.1 -0.3
carbon source succinate (C) -0.2 -0.2 -0.1 +0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 +0.2 -0.0 -0.3
carbon source L-tyrosine (C) +0.0 +0.5 -1.0 -0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.0 +0.5 -1.1 -0.0 +0.0
phage V2_100 +0.0 -0.5 +0.4 -0.3 -0.1
carbon source L-Tryptophan (C) +0.1 -0.2 -0.1 +0.0 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.0 +0.5 -1.0 +0.0 +0.0
carbon source a-Ketoglutaric (C) +0.0 -0.3 +0.2 -0.1 -0.2
carbon source L-Proline (C) -0.3 +0.1 +0.1 -0.1 -0.1
carbon source acetate (C) -0.2 -0.1 -0.1 -0.2 +0.2
carbon source Glycerol (C) +0.0 +0.2 -0.0 -0.1 -0.4
carbon source L-Alanine (C) +0.3 -0.4 +0.0 -0.1 -0.0
carbon source casaminos (C) -0.2 +0.1 -0.0 -0.2 +0.1
carbon source D-Serine (C) +0.1 +0.2 -0.1 -0.3 -0.1
plant outgrowth control Plant outgrowth control -0.1 -0.2 +0.1 +0.0 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 +0.2 +0.0 -0.1
carbon source L-tyrosine (C) -0.1 +0.1 +0.0 -0.3 +0.4
carbon source L-Fucose (C) +0.3 +0.1 -0.0 -0.1 -0.1
carbon source L-Threonine (C) +0.3 +0.1 +0.1 -0.0 -0.2
carbon source Tween 20 (C) +0.2 +0.4 -0.2 -0.1 +0.0
carbon source L-Phenylalanine (C) -0.1 +0.0 -0.0 +0.3 +0.1
carbon source Tween 20 (C) +0.1 +0.6 -0.3 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.3 +0.2 +0.2 -0.2
carbon source L-Phenylalanine (C) +0.1 +0.2 +0.1 +0.5 -0.1
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ABID97_RS03170
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ABID97_RS03175
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