Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03155 and ABID97_RS03160 overlap by 4 nucleotidesABID97_RS03160 and ABID97_RS03165 overlap by 8 nucleotidesABID97_RS03165 and ABID97_RS03170 overlap by 4 nucleotidesABID97_RS03170 and ABID97_RS03175 overlap by 4 nucleotides ABID97_RS03155: ABID97_RS03155 - ABC transporter permease, at 639,239 to 640,027 _RS03155 ABID97_RS03160: ABID97_RS03160 - ABC transporter permease subunit, at 640,024 to 640,794 _RS03160 ABID97_RS03165: ABID97_RS03165 - ABC transporter ATP-binding protein, at 640,787 to 641,569 _RS03165 ABID97_RS03170: ABID97_RS03170 - ABC transporter substrate-binding protein, at 641,566 to 642,510 _RS03170 ABID97_RS03175: ABID97_RS03175 - TetR/AcrR family transcriptional regulator, at 642,507 to 643,235 _RS03175
Group Condition ABID97_RS03155 ABID97_RS03160 ABID97_RS03165 ABID97_RS03170 ABID97_RS03175
carbon source acetate (C) N.D. N.D. -0.4 -0.2 -0.1
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.5 -0.0 -0.1
carbon source Glucuronamide (C) N.D. N.D. -0.4 -0.3 +0.0
carbon source L-Fucose (C) N.D. N.D. -0.2 -0.3 -0.1
phage V2_100 N.D. N.D. +0.2 +0.0 -0.5
carbon source Adenine (C) N.D. N.D. -0.5 +0.0 +0.1
carbon source L-Leucine (C) N.D. N.D. -0.2 +0.1 -0.3
carbon source D-Gluconic Acid (C) N.D. N.D. +0.2 -0.2 -0.3
carbon source L-Alanine (C) N.D. N.D. -0.1 +0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.5 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.3 -0.3 -0.2
carbon source L-Asparagine (C) N.D. N.D. +0.3 -0.2 -0.2
carbon source D-Serine (C) N.D. N.D. -0.4 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 +0.2 -0.3
carbon source a-Ketoglutaric (C) N.D. N.D. +0.3 +0.0 -0.3
carbon source L-Proline (C) N.D. N.D. +0.3 -0.3 +0.1
carbon source L-Fucose (C) N.D. N.D. -0.4 +0.3 +0.1
carbon source succinate (C) N.D. N.D. +0.5 -0.2 -0.2
carbon source D-Xylose (C) N.D. N.D. +0.4 +0.0 -0.2
carbon source Glycolic Acid (C) N.D. N.D. +0.4 -0.2 +0.0
carbon source D-Galactose (C) N.D. N.D. +0.4 -0.1 +0.1
carbon source D-Ribose (C) N.D. N.D. +0.4 -0.1 +0.1
carbon source Glucuronamide (C) N.D. N.D. +0.4 -0.0 +0.1
carbon source D-Glucuronic Acid (C) N.D. N.D. +0.3 +0.3 +0.1
carbon source Tween 20 (C) N.D. N.D. +0.1 +0.2 +0.4
carbon source Gly-Glu (C) N.D. N.D. +0.4 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.2 +0.0 +0.5
carbon source Tween 20 (C) N.D. N.D. +0.2 +0.1 +0.6
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.3 +0.0 +0.5
carbon source L-tyrosine (C) N.D. N.D. +0.4 +0.0 +0.5
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