Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03130 and ABID97_RS03135 are separated by 59 nucleotidesABID97_RS03135 and ABID97_RS03140 are separated by 235 nucleotidesABID97_RS03140 and ABID97_RS03145 are separated by 51 nucleotidesABID97_RS03145 and ABID97_RS03150 are separated by 20 nucleotides ABID97_RS03130: ABID97_RS03130 - MaoC family dehydratase, at 635,649 to 636,104 _RS03130 ABID97_RS03135: ABID97_RS03135 - adhesin, at 636,164 to 636,685 _RS03135 ABID97_RS03140: ABID97_RS03140 - tRNA-Gly, at 636,921 to 636,996 _RS03140 ABID97_RS03145: ABID97_RS03145 - fumarylacetoacetase, at 637,048 to 638,379 _RS03145 ABID97_RS03150: ABID97_RS03150 - cyclase family protein, at 638,400 to 639,206 _RS03150
Group Condition ABID97_RS03130 ABID97_RS03135 ABID97_RS03140 ABID97_RS03145 ABID97_RS03150
carbon source butyrate (C) -0.4 N.D. -2.1 -0.0 +0.0
carbon source L-Malic (C) +0.2 N.D. -1.9 +0.0 -0.2
carbon source Glycolic Acid (C) -0.0 N.D. -1.7 -0.1 +0.1
carbon source L-Alanine (C) +0.0 N.D. -1.3 -0.2 -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. -1.6 +0.0 -0.1
carbon source Tween 20 (C) +0.3 N.D. -1.8 +0.1 -0.1
carbon source D-Mannose (C) -0.0 N.D. -1.6 +0.0 +0.1
carbon source acetate (C) -0.5 N.D. -0.9 +0.1 -0.1
carbon source D-Sorbitol (C) -0.1 N.D. -1.2 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. -1.7 +0.3 -0.0
carbon source a-Ketoglutaric (C) +0.0 N.D. -0.9 -0.2 -0.2
carbon source L-Glutamine (C) -0.1 N.D. -1.1 -0.1 -0.1
phage V2_100 +0.1 N.D. -1.5 -0.2 +0.3
carbon source D-Fructose (C) +0.1 N.D. -1.2 -0.0 -0.1
carbon source D-Xylose (C) -0.1 N.D. -0.9 -0.1 -0.1
carbon source Adenine (C) -0.3 N.D. -0.7 -0.0 -0.2
carbon source L-Leucine (C) -0.1 N.D. -0.8 -0.0 -0.2
control NP +0.1 N.D. -1.0 -0.1 +0.0
carbon source a-Ketoglutaric (C) +0.2 N.D. -1.0 -0.0 -0.2
carbon source succinate (C) +0.1 N.D. -0.9 -0.2 +0.0
carbon source succinate (C) -0.3 N.D. -0.7 -0.0 +0.2
carbon source L-Fucose (C) +0.3 N.D. -1.2 -0.0 +0.1
carbon source L-Asparagine (C) +0.2 N.D. -0.8 -0.1 -0.1
carbon source L-Asparagine (C) +0.2 N.D. -0.9 +0.0 +0.0
carbon source butyrate (C) +0.3 N.D. -0.6 -0.2 -0.1
carbon source D-Glucuronic Acid (C) +0.3 N.D. -0.5 -0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. -0.7 +0.4 -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. -0.9 +0.1 +0.2
phage V1_10 -0.3 N.D. +0.8 -0.1 -0.2
carbon source D-Glucose (C) +0.2 N.D. +0.6 -0.2 -0.1
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ABID97_RS03130
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ABID97_RS03135
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