Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03080 and ABID97_RS03085 are separated by 155 nucleotidesABID97_RS03085 and ABID97_RS03090 overlap by 4 nucleotidesABID97_RS03090 and ABID97_RS03095 are separated by 136 nucleotidesABID97_RS03095 and ABID97_RS03100 are separated by 25 nucleotides ABID97_RS03080: ABID97_RS03080 - branched-chain amino acid ABC transporter permease, at 623,082 to 623,954 _RS03080 ABID97_RS03085: ABID97_RS03085 - ABC transporter substrate-binding protein, at 624,110 to 625,282 _RS03085 ABID97_RS03090: ABID97_RS03090 - alpha/beta hydrolase, at 625,279 to 626,082 _RS03090 ABID97_RS03095: ABID97_RS03095 - benzoate-CoA ligase family protein, at 626,219 to 627,769 _RS03095 ABID97_RS03100: ABID97_RS03100 - 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase, at 627,795 to 629,345 _RS03100
Group Condition ABID97_RS03080 ABID97_RS03085 ABID97_RS03090 ABID97_RS03095 ABID97_RS03100
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.0 -1.7 -0.7 -0.3
carbon source L-Lactate (C) -0.1 -0.3 -0.5 -0.7 -0.7
carbon source D-Gluconic Acid (C) -0.1 -0.2 -0.6 -0.4 -0.4
carbon source D-Glucuronic Acid (C) +0.1 -0.0 -0.5 -0.7 -0.6
carbon source a-Ketoglutaric (C) +0.0 -0.3 -0.7 -0.3 -0.4
carbon source D,L-Lactate (C) -0.1 -0.1 -0.5 -0.5 -0.4
carbon source L-Lactate (C) +0.3 -0.1 -0.7 -0.6 -0.4
carbon source D-Gluconic Acid (C) +0.0 -0.0 -0.4 -0.5 -0.5
carbon source D-Arabinose (C) +0.2 -0.3 -0.7 -0.3 -0.4
carbon source L-Malic (C) +0.1 -0.2 -0.6 -0.3 -0.4
carbon source D,L-Lactate (C) +0.0 +0.0 -0.5 -0.6 -0.3
carbon source D-Mannose (C) +0.1 -0.2 -0.7 -0.4 -0.1
carbon source D-Mannose (C) -0.1 +0.1 -0.3 -0.4 -0.6
carbon source D-Ribose (C) -0.1 -0.2 -0.4 -0.1 -0.3
carbon source Glycerol (C) -0.1 -0.2 -0.5 -0.3 -0.1
carbon source acetate (C) -0.1 -0.2 -0.3 -0.3 -0.3
carbon source L-Alanine (C) -0.0 -0.2 +0.0 -0.4 -0.5
carbon source Tween 20 (C) -0.1 -0.3 +0.1 -0.4 -0.3
carbon source Gly-Glu (C) +0.2 -0.1 -0.3 -0.4 -0.4
carbon source D-Arabinose (C) -0.2 -0.2 +0.1 -0.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 -0.8 -0.1 -0.0
carbon source D-Glucose (C) +0.2 -0.2 -0.3 -0.3 -0.3
plant outgrowth control Plant outgrowth control +0.1 +0.2 -0.3 -0.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.0 -0.8 -0.1 +0.1
carbon source L-tyrosine (C) +0.3 +0.1 -0.7 +0.0 -0.2
carbon source L-Histidine (C) -0.3 -0.7 +0.4 +0.5 +0.0
carbon source L-Histidine (C) -0.1 -0.3 +0.1 +0.5 -0.2
carbon source propionate (C) +0.0 +0.7 -0.2 -0.1 +0.4
carbon source butyrate (C) -0.0 +0.1 +0.2 +0.6 +0.2
carbon source butyrate (C) +0.1 -0.1 +0.8 +0.6 +0.4
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ABID97_RS03080
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ABID97_RS03085
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