Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS03045 and ABID97_RS03050 are separated by 16 nucleotidesABID97_RS03050 and ABID97_RS03055 are separated by 28 nucleotidesABID97_RS03055 and ABID97_RS03060 are separated by 105 nucleotidesABID97_RS03060 and ABID97_RS03065 are separated by 6 nucleotides ABID97_RS03045: ABID97_RS03045 - Crp/Fnr family transcriptional regulator, at 617,777 to 618,484 _RS03045 ABID97_RS03050: ABID97_RS03050 - 4-oxalocrotonate tautomerase family protein, at 618,501 to 618,725 _RS03050 ABID97_RS03055: ABID97_RS03055 - SDR family oxidoreductase, at 618,754 to 619,500 _RS03055 ABID97_RS03060: ABID97_RS03060 - LysR substrate-binding domain-containing protein, at 619,606 to 620,517 _RS03060 ABID97_RS03065: ABID97_RS03065 - ABC transporter ATP-binding protein, at 620,524 to 621,225 _RS03065
Group Condition ABID97_RS03045 ABID97_RS03050 ABID97_RS03055 ABID97_RS03060 ABID97_RS03065
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. -0.1 -0.2 -1.2
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. -0.6 +0.1 -0.7
carbon source L-Lactate (C) +0.1 N.D. -0.4 -0.0 -0.9
carbon source D-Sorbitol (C) -0.1 N.D. -0.3 -0.1 -0.8
carbon source Glycolic Acid (C) -0.4 N.D. -0.3 +0.0 -0.5
carbon source D-Fructose (C) -0.3 N.D. +0.1 -0.1 -0.8
carbon source L-Arabinose (C) -0.5 N.D. -0.1 -0.0 -0.3
carbon source succinate (C) +0.0 N.D. +0.0 -0.0 -0.8
carbon source Glycolic Acid (C) -0.2 N.D. -0.3 +0.1 -0.3
carbon source L-Histidine (C) -0.3 N.D. +0.2 -0.1 -0.5
carbon source Adenine (C) -0.6 N.D. +0.2 +0.0 -0.3
carbon source L-Arabinose (C) +0.2 N.D. -0.1 -0.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. +0.4 +0.0 -0.6
carbon source D,L-Malic Acid (C) +0.3 N.D. -0.3 -0.0 -0.4
carbon source D-Glucuronic Acid (C) -0.4 N.D. +0.3 -0.2 -0.2
carbon source L-Alanine (C) -0.4 N.D. +0.4 +0.1 -0.4
carbon source propionate (C) -0.7 N.D. +0.5 -0.0 +0.0
phage V2_100 +0.7 N.D. -0.2 -0.5 -0.0
carbon source acetate (C) -0.3 N.D. -0.3 -0.1 +0.8
carbon source Adenine (C) -0.3 N.D. +0.4 -0.2 +0.2
carbon source L-Histidine (C) -0.5 N.D. +0.1 -0.2 +0.7
carbon source 2-Deoxy-D-Ribose (C) -0.4 N.D. +0.1 +0.0 +0.5
carbon source 2-Deoxy-D-Ribose (C) -0.4 N.D. -0.2 -0.1 +0.9
carbon source L-Fucose (C) -0.4 N.D. +0.5 +0.1 +0.3
carbon source propionate (C) -0.5 N.D. +1.5 -0.2 -0.2
carbon source Glycerol (C) +0.2 N.D. +0.3 -0.2 +0.5
carbon source succinate (C) +0.2 N.D. +0.4 +0.1 +0.3
carbon source butyrate (C) -0.1 N.D. +0.1 +0.1 +0.9
r2a outgrowth control R2A outgrowth control -0.1 N.D. +0.5 -0.0 +0.6
carbon source L-tyrosine (C) -0.2 N.D. -0.2 +0.2 +1.2
remove
ABID97_RS03045
plot		 remove
ABID97_RS03050
plot		 remove
ABID97_RS03055		 remove
ABID97_RS03060
plot		 remove
ABID97_RS03065
plot