Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS03015 and ABID97_RS03020 are separated by 83 nucleotidesABID97_RS03020 and ABID97_RS03025 are separated by 29 nucleotidesABID97_RS03025 and ABID97_RS03030 are separated by 1 nucleotidesABID97_RS03030 and ABID97_RS03035 are separated by 10 nucleotides ABID97_RS03015: ABID97_RS03015 - hotdog fold thioesterase, at 611,048 to 611,470 _RS03015 ABID97_RS03020: ABID97_RS03020 - hypothetical protein, at 611,554 to 612,885 _RS03020 ABID97_RS03025: ABID97_RS03025 - feruloyl-CoA synthase, at 612,915 to 614,720 _RS03025 ABID97_RS03030: ABID97_RS03030 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein, at 614,722 to 615,663 _RS03030 ABID97_RS03035: ABID97_RS03035 - Bug family tripartite tricarboxylate transporter substrate binding protein, at 615,674 to 616,666 _RS03035
Group Condition ABID97_RS03015 ABID97_RS03020 ABID97_RS03025 ABID97_RS03030 ABID97_RS03035
carbon source L-tyrosine (C) -5.4 -0.4 +0.3 +0.6 +0.3
carbon source D-Serine (C) -1.7 +0.0 -0.3 -0.1 -0.2
carbon source a-Ketoglutaric (C) -1.2 -0.4 -0.1 -0.1 -0.3
carbon source L-Histidine (C) -1.5 +0.3 -0.3 +0.1 -0.0
carbon source Ethanol (C) -1.2 +0.2 -0.1 +0.0 -0.2
carbon source L-Glutamic (C) -1.1 +0.1 -0.1 -0.1 -0.0
carbon source casaminos (C) -1.0 +0.0 -0.0 -0.2 -0.1
carbon source L-Fucose (C) -0.9 -0.1 -0.1 -0.1 -0.1
carbon source L-Malic (C) -0.7 +0.1 -0.2 -0.2 -0.2
phage V2_100 -1.8 +0.2 +0.2 +0.4 -0.2
carbon source D-Glucose (C) -0.7 -0.4 +0.3 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.3 -0.1 -0.4 -0.2
carbon source Fumarate (C) -0.9 -0.1 -0.0 +0.3 -0.1
carbon source L-Arabinose (C) +0.1 -0.3 -0.4 +0.2 -0.4
carbon source L-Tryptophan (C) -1.1 +0.2 -0.0 +0.1 +0.0
carbon source Tween 20 (C) -0.7 +0.1 -0.2 -0.1 +0.1
carbon source L-Histidine (C) -0.7 +0.1 +0.2 -0.3 -0.2
carbon source D-Xylose (C) -0.6 +0.3 +0.0 -0.1 -0.3
carbon source Formate (C) +0.4 -0.7 -0.1 -0.1 -0.1
carbon source Glucuronamide (C) -0.7 +0.1 +0.1 +0.3 -0.4
carbon source D,L-Lactate (C) +0.3 -0.4 +0.1 -0.2 -0.3
carbon source D,L-Malic Acid (C) -0.7 +0.2 +0.1 +0.0 -0.1
carbon source L-Arabinose (C) -0.7 -0.0 +0.2 +0.4 -0.2
carbon source propionate (C) -0.8 +0.1 -0.0 +0.4 +0.0
carbon source L-Phenylalanine (C) -0.7 +0.1 +0.1 +0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 -0.2 +0.1 -0.5 -0.0
carbon source Glycerol (C) -0.3 -0.1 +0.2 +0.5 +0.1
carbon source butyrate (C) +1.1 +0.2 -0.1 -0.3 -0.0
carbon source butyrate (C) +0.8 -0.2 +0.1 -0.1 +0.4
carbon source L-Alanine (C) -0.6 +0.2 +1.3 +0.2 -0.1
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ABID97_RS03015
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ABID97_RS03020
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ABID97_RS03030
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ABID97_RS03035
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