Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS02855 and ABID97_RS02860 overlap by 4 nucleotidesABID97_RS02860 and ABID97_RS02865 overlap by 8 nucleotidesABID97_RS02865 and ABID97_RS02870 are separated by 62 nucleotidesABID97_RS02870 and ABID97_RS02875 are separated by 88 nucleotides ABID97_RS02855: ABID97_RS02855 - sensor histidine kinase N-terminal domain-containing protein, at 583,497 to 584,891 _RS02855 ABID97_RS02860: ABID97_RS02860 - VOC family protein, at 584,888 to 585,667 _RS02860 ABID97_RS02865: ABID97_RS02865 - RidA family protein, at 585,660 to 586,145 _RS02865 ABID97_RS02870: ABID97_RS02870 - alkene reductase, at 586,208 to 587,311 _RS02870 ABID97_RS02875: ABID97_RS02875 - acyclic terpene utilization AtuA family protein, at 587,400 to 589,247 _RS02875
Group Condition ABID97_RS02855 ABID97_RS02860 ABID97_RS02865 ABID97_RS02870 ABID97_RS02875
carbon source D,L-Malic Acid (C) -4.6 -0.0 -0.2 -0.1 -0.1
carbon source L-Malic (C) -1.7 -0.3 -0.2 -0.2 -0.0
carbon source D-Glucuronic Acid (C) -2.1 -0.1 +0.1 +0.1 -0.2
carbon source D-Gluconic Acid (C) -1.6 -0.1 -0.3 -0.1 -0.2
carbon source D-Gluconic Acid (C) -1.6 -0.2 -0.2 +0.0 -0.0
carbon source a-Ketoglutaric (C) -1.4 -0.2 -0.2 -0.1 -0.1
carbon source L-Malic (C) -1.6 -0.1 -0.1 -0.0 -0.1
carbon source L-Histidine (C) -1.4 -0.2 +0.1 -0.2 -0.0
carbon source L-Arabinose (C) -0.9 -0.3 -0.3 -0.0 -0.2
carbon source L-Histidine (C) -1.6 -0.1 -0.0 +0.1 +0.1
carbon source a-Ketoglutaric (C) -1.2 -0.1 +0.0 -0.1 -0.1
carbon source Glucuronamide (C) -0.9 -0.1 -0.3 -0.1 -0.1
carbon source butyrate (C) -0.5 -0.3 -0.1 -0.3 -0.1
carbon source Glycolic Acid (C) -0.7 -0.1 -0.2 -0.1 -0.1
carbon source L-Alanine (C) -0.5 -0.2 -0.0 -0.3 -0.1
carbon source D-Mannose (C) -0.7 -0.4 -0.2 +0.1 +0.0
carbon source L-Phenylalanine (C) -0.6 -0.1 -0.2 -0.0 -0.1
r2a outgrowth control R2A outgrowth control -0.6 -0.2 +0.0 -0.2 -0.1
carbon source L-Fucose (C) -0.8 -0.2 -0.1 +0.2 +0.0
carbon source D-Galactose (C) -0.5 -0.3 +0.1 +0.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.2 -0.4 +0.2 -0.2
carbon source D-Glucose (C) -0.5 -0.3 +0.1 +0.2 -0.1
carbon source L-Alanine (C) -0.5 -0.1 -0.3 +0.1 +0.3
carbon source D-Arabinose (C) -0.5 +0.2 -0.2 +0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -0.4 +0.1 +0.1 +0.2
carbon source propionate (C) -0.6 -0.1 +0.2 +0.1 -0.1
carbon source D-Fructose (C) -0.7 +0.5 +0.1 +0.0 -0.1
carbon source D-Fructose (C) -0.7 +0.5 +0.1 +0.0 +0.1
carbon source propionate (C) -0.3 -0.1 +0.4 +0.4 -0.0
phage V2_100 +0.2 +0.4 +0.3 +0.1 +0.4
remove
ABID97_RS02855
plot		 remove
ABID97_RS02860
plot		 remove
ABID97_RS02865		 remove
ABID97_RS02870
plot		 remove
ABID97_RS02875
plot