Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS02710 and ABID97_RS02715 are separated by 12 nucleotidesABID97_RS02715 and ABID97_RS02720 are separated by 151 nucleotidesABID97_RS02720 and ABID97_RS02725 overlap by 4 nucleotidesABID97_RS02725 and ABID97_RS02730 are separated by 85 nucleotides ABID97_RS02710: ABID97_RS02710 - metallophosphoesterase, at 552,703 to 553,890 _RS02710 ABID97_RS02715: ABID97_RS02715 - polyhydroxyalkanoate granule-associated phasin, at 553,903 to 554,400 _RS02715 ABID97_RS02720: ABID97_RS02720 - lysylphosphatidylglycerol synthase domain-containing protein, at 554,552 to 555,520 _RS02720 ABID97_RS02725: ABID97_RS02725 - cardiolipin synthase ClsB, at 555,517 to 556,797 _RS02725 ABID97_RS02730: ABID97_RS02730 - endonuclease/exonuclease/phosphatase family protein, at 556,883 to 557,665 _RS02730
Group Condition ABID97_RS02710 ABID97_RS02715 ABID97_RS02720 ABID97_RS02725 ABID97_RS02730
carbon source Glucuronamide (C) +0.2 -0.8 -0.2 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.7 -0.1 +0.1 -0.1
r2a outgrowth control R2A outgrowth control +0.3 -0.4 +0.0 -0.0 -0.3
carbon source D-Glucose (C) +0.3 -0.2 -0.2 -0.0 -0.2
carbon source D-Arabinose (C) +0.3 -0.3 -0.0 +0.0 -0.3
carbon source acetate (C) +0.3 -0.8 -0.0 +0.1 +0.1
carbon source D,L-Malic Acid (C) -0.5 +0.4 -0.1 +0.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.6 +0.2 +0.2 -0.0
carbon source L-Proline (C) +0.4 -0.3 -0.1 +0.1 -0.1
carbon source acetate (C) +0.3 -0.3 +0.0 +0.1 -0.1
carbon source D-Mannose (C) +0.3 -0.3 +0.0 +0.2 -0.2
carbon source L-Malic (C) +0.4 +0.0 -0.2 +0.2 -0.3
carbon source D-Arabinose (C) +0.4 -0.3 -0.2 -0.0 +0.1
carbon source propionate (C) +0.6 -0.1 -0.1 +0.3 -0.5
carbon source propionate (C) +0.2 +0.4 -0.0 -0.1 -0.4
carbon source L-Proline (C) +0.5 -0.4 -0.0 +0.1 +0.1
carbon source L-Malic (C) +0.4 +0.3 -0.3 +0.2 -0.4
carbon source Fumarate (C) +0.2 +0.4 -0.1 +0.1 -0.1
carbon source D-Gluconic Acid (C) +0.7 -0.1 +0.0 +0.1 -0.2
carbon source D-Gluconic Acid (C) +0.7 +0.1 -0.1 +0.1 -0.1
carbon source L-Tryptophan (C) +0.4 +0.1 -0.1 +0.2 +0.1
carbon source Glucuronamide (C) +0.5 +0.4 -0.1 +0.0 +0.0
carbon source L-Histidine (C) +0.6 -0.2 -0.0 +0.3 +0.1
carbon source butyrate (C) +1.0 +0.2 -0.1 -0.1 -0.0
carbon source D-Glucuronic Acid (C) +0.5 +0.5 -0.2 +0.3 -0.1
carbon source L-tyrosine (C) +0.3 +0.2 +0.3 +0.1 +0.1
carbon source Glycolic Acid (C) +0.6 +0.6 -0.1 +0.2 -0.1
phage V2_100 +0.5 +0.8 +0.1 -0.1 +0.0
carbon source butyrate (C) +1.0 +0.0 +0.0 +0.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.7 -0.1 +0.1 -0.0
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ABID97_RS02715
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ABID97_RS02725
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ABID97_RS02730
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