Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS02440 and ABID97_RS02445 are separated by 63 nucleotidesABID97_RS02445 and ABID97_RS02450 are separated by 135 nucleotidesABID97_RS02450 and ABID97_RS02455 are separated by 23 nucleotidesABID97_RS02455 and ABID97_RS02460 overlap by 4 nucleotides ABID97_RS02440: ABID97_RS02440 - type I glyceraldehyde-3-phosphate dehydrogenase, at 488,701 to 489,702 _RS02440 ABID97_RS02445: ABID97_RS02445 - transketolase, at 489,766 to 491,874 _RS02445 ABID97_RS02450: ABID97_RS02450 - adenosylmethionine decarboxylase, at 492,010 to 492,390 _RS02450 ABID97_RS02455: ABID97_RS02455 - nucleotidyltransferase family protein, at 492,414 to 493,124 _RS02455 ABID97_RS02460: ABID97_RS02460 - aminopeptidase P N-terminal domain-containing protein, at 493,121 to 494,515 _RS02460
Group Condition ABID97_RS02440 ABID97_RS02445 ABID97_RS02450 ABID97_RS02455 ABID97_RS02460
carbon source D-Gluconic Acid (C) N.D. N.D. -0.3 -6.6 -2.3
carbon source D-Gluconic Acid (C) N.D. N.D. -0.2 -6.7 -2.1
carbon source D-Glucose (C) N.D. N.D. -0.0 -6.4 -1.7
carbon source L-Alanine (C) N.D. N.D. -0.1 -4.6 -2.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 -4.2 -2.6
carbon source Glycolic Acid (C) N.D. N.D. -0.2 -4.3 -2.5
carbon source L-Alanine (C) N.D. N.D. -0.3 -4.5 -2.1
carbon source L-Tryptophan (C) N.D. N.D. +0.1 -4.9 -1.8
carbon source D-Glucose (C) N.D. N.D. +0.2 -5.1 -1.6
carbon source D-Xylose (C) N.D. N.D. +0.0 -3.9 -2.5
carbon source Glycerol (C) N.D. N.D. -0.1 -4.1 -2.0
carbon source Gly-Glu (C) N.D. N.D. -0.1 -4.2 -2.0
carbon source L-Histidine (C) N.D. N.D. -0.2 -2.7 -3.1
carbon source Gly-Glu (C) N.D. N.D. -0.1 -3.6 -2.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.0 -3.7 -2.1
carbon source D-Xylose (C) N.D. N.D. -0.1 -3.2 -2.4
carbon source D-Mannose (C) N.D. N.D. -0.1 -3.7 -1.9
carbon source D-Glucuronic Acid (C) N.D. N.D. -0.3 -2.4 -2.9
carbon source L-Leucine (C) N.D. N.D. -0.1 -3.7 -1.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.0 -2.7 -3.0
carbon source L-Leucine (C) N.D. N.D. -0.0 -3.8 -1.8
carbon source L-Histidine (C) N.D. N.D. -0.1 -2.1 -3.3
carbon source Glycerol (C) N.D. N.D. -0.1 -3.6 -1.7
carbon source L-Tryptophan (C) N.D. N.D. +0.0 -3.2 -2.0
carbon source Glycolic Acid (C) N.D. N.D. -0.1 -3.1 -1.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.1 -1.4 -3.7
carbon source Tween 20 (C) N.D. N.D. +0.0 -3.4 -1.5
carbon source Tween 20 (C) N.D. N.D. -0.1 -3.0 -1.6
carbon source L-Arabinose (C) N.D. N.D. -0.3 -3.0 -1.5
carbon source D-Mannose (C) N.D. N.D. -0.1 -2.8 -1.7
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