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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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500 nt
ABID97_RS02115 and ABID97_RS02120 overlap by 4 nucleotides
ABID97_RS02120 and ABID97_RS02125 are separated by 13 nucleotides
ABID97_RS02125 and ABID97_RS02130 overlap by 4 nucleotides
ABID97_RS02130 and ABID97_RS02135 overlap by 4 nucleotides
ABID97_RS02115: ABID97_RS02115 - PilW family protein, at 424,395 to 425,426
_RS02115
ABID97_RS02120: ABID97_RS02120 - PilX N-terminal domain-containing pilus assembly protein, at 425,423 to 426,046
_RS02120
ABID97_RS02125: ABID97_RS02125 - PilC/PilY family type IV pilus protein, at 426,060 to 430,451
_RS02125
ABID97_RS02130: ABID97_RS02130 - type IV pilin protein, at 430,448 to 430,909
_RS02130
ABID97_RS02135: ABID97_RS02135 - GspH/FimT family pseudopilin, at 430,906 to 431,481
_RS02135
Group
Condition
ABID97
_RS02115
ABID97
_RS02120
ABID97
_RS02125
ABID97
_RS02130
ABID97
_RS02135
carbon source
D-Gluconic Acid (C)
-4.5
-3.9
-4.1
-2.7
-4.3
carbon source
D-Gluconic Acid (C)
-3.7
-4.2
-3.5
-2.8
-3.7
carbon source
Gly-Glu (C)
-3.0
-2.5
-2.5
-1.8
-2.7
carbon source
Gly-Glu (C)
-2.7
-2.7
-2.6
-1.9
-2.4
carbon source
Glycerol (C)
-2.4
-2.8
-2.5
-2.0
-2.6
carbon source
Glycerol (C)
-2.6
-2.3
-2.5
-1.8
-2.5
carbon source
butyrate (C)
-2.4
-2.3
-2.3
-2.1
-2.0
carbon source
L-Malic (C)
-2.2
-2.2
-2.3
-1.8
-2.6
carbon source
D-Arabinose (C)
-2.1
-2.1
-2.0
-1.5
-2.5
carbon source
L-Lactate (C)
-2.3
-2.2
-2.1
-1.5
-1.9
carbon source
L-Malic (C)
-2.0
-2.2
-2.2
-1.9
-1.8
carbon source
L-Lactate (C)
-2.1
-1.8
-2.0
-1.8
-2.1
carbon source
succinate (C)
-2.1
-2.3
-1.9
-1.7
-1.8
carbon source
L-Arabinose (C)
-2.0
-1.7
-1.9
-1.7
-2.3
carbon source
succinate (C)
-2.0
-2.0
-1.9
-1.9
-1.9
carbon source
butyrate (C)
-2.0
-1.8
-2.0
-1.9
-1.9
carbon source
pyruvate (C)
-1.7
-1.8
-1.9
-1.7
-2.3
carbon source
L-Glutamic (C)
-1.9
-1.9
-1.9
-1.5
-2.1
carbon source
D,L-Lactate (C)
-1.9
-1.8
-1.9
-1.5
-2.2
carbon source
L-Alanine (C)
-1.8
-2.1
-1.9
-1.5
-2.0
carbon source
L-Alanine (C)
-2.0
-2.2
-1.7
-1.9
-1.3
carbon source
D-Ribose (C)
-1.7
-1.8
-1.8
-1.6
-2.2
carbon source
L-Proline (C)
-1.9
-2.0
-1.9
-1.6
-1.7
carbon source
L-tyrosine (C)
-1.7
-1.9
-1.5
-1.1
-2.9
carbon source
L-Glutamine (C)
-1.8
-1.9
-1.8
-1.5
-2.0
phage
V1_10
+2.8
+2.7
+2.9
+2.5
+3.0
phage
V1_10
+2.8
+2.7
+2.9
+2.6
+3.1
phage
V2_10
+2.8
+3.0
+3.0
+2.7
+3.2
phage
V2_10
+2.9
+3.1
+3.1
+2.7
+3.2
phage
V2_100
+5.6
+5.7
+5.8
+5.4
+5.9
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