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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS02095 and ABID97_RS02100 are separated by 54 nucleotides
ABID97_RS02100 and ABID97_RS02105 are separated by 18 nucleotides
ABID97_RS02105 and ABID97_RS02110 are separated by 128 nucleotides
ABID97_RS02110 and ABID97_RS02115 overlap by 4 nucleotides
ABID97_RS02095: ABID97_RS02095 - M48 family metalloprotease, at 419,825 to 421,390
_RS02095
ABID97_RS02100: ABID97_RS02100 - cyclic pyranopterin monophosphate synthase MoaC, at 421,445 to 421,927
_RS02100
ABID97_RS02105: ABID97_RS02105 - Wzy polymerase domain-containing protein, at 421,946 to 423,682
_RS02105
ABID97_RS02110: ABID97_RS02110 - type IV pilus modification protein PilV, at 423,811 to 424,398
_RS02110
ABID97_RS02115: ABID97_RS02115 - PilW family protein, at 424,395 to 425,426
_RS02115
Group
Condition
ABID97
_RS02095
ABID97
_RS02100
ABID97
_RS02105
ABID97
_RS02110
ABID97
_RS02115
carbon source
D-Gluconic Acid (C)
-0.1
-0.1
+0.0
-4.5
-4.5
carbon source
D-Gluconic Acid (C)
-0.1
-0.5
+0.1
-3.7
-3.7
carbon source
Adenine (C)
-0.0
-4.1
-0.1
-1.7
-1.2
carbon source
Gly-Glu (C)
+0.1
-0.0
-0.1
-2.6
-3.0
carbon source
Adenine (C)
-0.2
-2.2
+0.1
-1.9
-1.5
carbon source
Gly-Glu (C)
-0.1
+0.2
+0.1
-3.0
-2.7
carbon source
Glycerol (C)
+0.0
-0.4
-0.0
-2.6
-2.4
carbon source
Glycerol (C)
+0.1
+0.0
-0.2
-2.6
-2.6
carbon source
butyrate (C)
+0.1
-0.8
-0.1
-2.2
-2.0
carbon source
butyrate (C)
-0.1
-0.2
-0.1
-2.4
-2.4
carbon source
L-Malic (C)
-0.1
-0.1
+0.0
-2.6
-2.2
carbon source
L-Lactate (C)
-0.1
-0.0
-0.1
-2.1
-2.3
carbon source
L-Lactate (C)
-0.1
-0.2
+0.0
-2.2
-2.1
carbon source
D,L-Lactate (C)
-0.1
-0.3
-0.2
-1.9
-1.9
carbon source
L-Fucose (C)
-0.0
-0.7
+0.1
-1.8
-2.0
carbon source
succinate (C)
+0.0
-0.1
+0.0
-2.1
-2.1
carbon source
L-Malic (C)
+0.0
-0.0
+0.1
-2.4
-2.0
carbon source
succinate (C)
-0.0
+0.0
+0.1
-2.3
-2.0
carbon source
D-Arabinose (C)
-0.1
+0.1
-0.1
-2.0
-2.1
carbon source
D-Arabinose (C)
-0.0
+0.0
-0.1
-2.1
-1.9
carbon source
L-Alanine (C)
+0.1
+0.1
+0.2
-2.0
-2.0
carbon source
L-Alanine (C)
-0.1
+0.4
+0.1
-2.0
-1.8
carbon source
L-Proline (C)
+0.0
+0.6
-0.0
-2.1
-1.9
carbon source
L-Histidine (C)
-0.1
+0.9
-0.2
-1.5
-1.8
carbon source
Formate (C)
-0.2
+1.3
-0.1
-1.8
-1.8
phage
V1_10
-0.0
+0.1
-0.0
+2.9
+2.8
phage
V2_10
+0.0
+0.1
+0.1
+2.9
+2.8
phage
V2_10
-0.0
-0.1
+0.2
+3.0
+2.9
phage
V1_10
+0.1
+0.2
+0.2
+2.8
+2.8
phage
V2_100
-0.2
-0.2
+0.4
+5.6
+5.6
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