Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01885 and ABID97_RS01890 overlap by 11 nucleotidesABID97_RS01890 and ABID97_RS01895 are separated by 102 nucleotidesABID97_RS01895 and ABID97_RS01900 are separated by 143 nucleotidesABID97_RS01900 and ABID97_RS01905 are separated by 20 nucleotides ABID97_RS01885: ABID97_RS01885 - ABC transporter permease, at 373,080 to 373,970 _RS01885 ABID97_RS01890: ABID97_RS01890 - FAD-binding oxidoreductase, at 373,960 to 375,339 _RS01890 ABID97_RS01895: ABID97_RS01895 - ABC transporter substrate-binding protein, at 375,442 to 376,470 _RS01895 ABID97_RS01900: ABID97_RS01900 - NAD(P)H-dependent oxidoreductase, at 376,614 to 377,204 _RS01900 ABID97_RS01905: ABID97_RS01905 - PDR/VanB family oxidoreductase, at 377,225 to 378,196 _RS01905
Group Condition ABID97_RS01885 ABID97_RS01890 ABID97_RS01895 ABID97_RS01900 ABID97_RS01905
carbon source L-Phenylalanine (C) -1.1 -2.0 -0.3 +1.5 -6.0
carbon source L-Phenylalanine (C) -1.0 -1.7 +0.0 +1.3 -5.7
carbon source L-Alanine (C) -0.1 -0.5 -0.2 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.0 -0.0 -0.8 -0.4
carbon source L-Threonine (C) -0.1 -0.1 -0.1 -0.2 -0.2
carbon source L-Histidine (C) -0.1 +0.1 -0.1 -0.2 -0.3
phage V2_10 +0.1 -0.2 +0.0 -0.5 -0.1
carbon source L-Alanine (C) +0.2 -0.1 -0.2 +0.1 -0.6
carbon source Formate (C) -0.2 -0.2 -0.0 +0.3 -0.3
carbon source D-Sorbitol (C) -0.2 -0.3 -0.1 +0.5 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.5 -0.0 +0.1 -0.2
carbon source Ethanol (C) -0.1 -0.4 +0.1 +0.2 -0.1
carbon source D,L-Malic Acid (C) +0.1 -0.5 +0.1 +0.1 -0.1
carbon source D-Glucuronic Acid (C) -0.2 +0.1 -0.1 +0.3 -0.2
carbon source Tween 20 (C) -0.1 -0.0 +0.2 +0.4 -0.6
carbon source a-Ketoglutaric (C) -0.2 +0.2 -0.1 +0.4 -0.3
carbon source Adenine (C) -0.1 -0.1 +0.1 +0.3 -0.2
control NP +0.1 +0.2 -0.1 -0.4 +0.1
carbon source L-Tryptophan (C) -0.1 +0.0 -0.0 +0.5 -0.4
carbon source casaminos (C) +0.1 +0.1 +0.1 +0.2 -0.5
carbon source D-Ribose (C) -0.1 -0.1 +0.0 +0.4 -0.2
carbon source L-Fucose (C) -0.1 -0.1 -0.2 +0.6 -0.2
carbon source D,L-Malic Acid (C) -0.2 -0.1 +0.1 +0.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.1 +0.1 +0.5 -0.3
carbon source Ethanol (C) -0.1 -0.0 -0.1 +0.5 -0.1
carbon source D-Glucose (C) -0.0 -0.1 -0.1 +0.6 -0.1
carbon source D-Fructose (C) -0.0 -0.1 -0.0 +0.6 -0.1
carbon source L-Glutamic (C) -0.0 +0.2 -0.0 +0.4 -0.2
carbon source Fumarate (C) -0.1 -0.1 +0.1 +0.6 -0.0
carbon source propionate (C) -0.1 +0.2 +0.0 +0.5 -0.0
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