Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01725 and ABID97_RS01730 are separated by 25 nucleotidesABID97_RS01730 and ABID97_RS01735 are separated by 102 nucleotidesABID97_RS01735 and ABID97_RS01740 are separated by 64 nucleotidesABID97_RS01740 and ABID97_RS01745 are separated by 57 nucleotides ABID97_RS01725: ABID97_RS01725 - META domain-containing protein, at 338,546 to 338,986 _RS01725 ABID97_RS01730: ABID97_RS01730 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 339,012 to 339,917 _RS01730 ABID97_RS01735: ABID97_RS01735 - class II fructose-bisphosphate aldolase, at 340,020 to 341,084 _RS01735 ABID97_RS01740: ABID97_RS01740 - alpha/beta hydrolase, at 341,149 to 342,087 _RS01740 ABID97_RS01745: ABID97_RS01745 - Lrp/AsnC family transcriptional regulator, at 342,145 to 342,651 _RS01745
Group Condition ABID97_RS01725 ABID97_RS01730 ABID97_RS01735 ABID97_RS01740 ABID97_RS01745
carbon source L-Arabinose (C) -3.1 N.D. N.D. -0.0 +0.2
carbon source butyrate (C) -1.9 N.D. N.D. -0.5 +0.2
carbon source D-Ribose (C) -1.4 N.D. N.D. -0.1 +0.1
carbon source Glucuronamide (C) -1.3 N.D. N.D. -0.2 +0.1
carbon source D-Glucuronic Acid (C) -1.1 N.D. N.D. -0.3 +0.1
carbon source L-Lactate (C) -1.1 N.D. N.D. +0.0 -0.1
r2a outgrowth control R2A outgrowth control -1.2 N.D. N.D. -0.1 +0.1
carbon source Fumarate (C) -1.0 N.D. N.D. -0.0 -0.1
carbon source L-Alanine (C) -0.6 N.D. N.D. -0.2 -0.4
carbon source L-Leucine (C) -1.1 N.D. N.D. +0.0 -0.1
r2a outgrowth control R2A outgrowth control -0.7 N.D. N.D. -0.1 -0.2
carbon source D-Gluconic Acid (C) -0.7 N.D. N.D. -0.2 -0.1
carbon source Glucuronamide (C) -0.7 N.D. N.D. +0.1 -0.2
carbon source Gly-Glu (C) -0.7 N.D. N.D. -0.3 +0.2
carbon source L-Phenylalanine (C) -0.7 N.D. N.D. -0.3 +0.2
control NP -1.0 N.D. N.D. +0.2 -0.0
carbon source Ethanol (C) -0.7 N.D. N.D. -0.3 +0.3
carbon source L-Malic (C) -0.8 N.D. N.D. +0.0 +0.2
phage V2_100 -0.7 N.D. N.D. +0.2 +0.2
plant outgrowth control Plant outgrowth control -0.8 N.D. N.D. +0.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 N.D. N.D. -0.1 -0.4
carbon source L-Leucine (C) +0.6 N.D. N.D. -0.2 -0.4
carbon source Glycolic Acid (C) +0.4 N.D. N.D. -0.3 +0.2
carbon source D-Arabinose (C) +0.7 N.D. N.D. -0.2 -0.1
carbon source L-Phenylalanine (C) +1.1 N.D. N.D. -0.2 -0.4
carbon source L-tyrosine (C) +0.7 N.D. N.D. -0.3 +0.1
carbon source L-Histidine (C) +0.9 N.D. N.D. -0.0 -0.3
carbon source D-Sorbitol (C) +0.8 N.D. N.D. -0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. N.D. +0.1 +0.1
carbon source butyrate (C) +0.9 N.D. N.D. -0.0 +0.3
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