Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01685 and ABID97_RS01690 are separated by 129 nucleotidesABID97_RS01690 and ABID97_RS01695 are separated by 38 nucleotidesABID97_RS01695 and ABID97_RS01700 overlap by 4 nucleotidesABID97_RS01700 and ABID97_RS01705 overlap by 4 nucleotides ABID97_RS01685: ABID97_RS01685 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 329,848 to 331,281 _RS01685 ABID97_RS01690: ABID97_RS01690 - prolyl oligopeptidase family serine peptidase, at 331,411 to 332,997 _RS01690 ABID97_RS01695: ABID97_RS01695 - L-threonylcarbamoyladenylate synthase, at 333,036 to 334,037 _RS01695 ABID97_RS01700: ABID97_RS01700 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 334,034 to 335,224 _RS01700 ABID97_RS01705: ABID97_RS01705 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 335,221 to 335,769 _RS01705
Group Condition ABID97_RS01685 ABID97_RS01690 ABID97_RS01695 ABID97_RS01700 ABID97_RS01705
carbon source D,L-Malic Acid (C) -0.4 -0.0 N.D. N.D. N.D.
carbon source L-Tryptophan (C) -0.1 -0.2 N.D. N.D. N.D.
carbon source D-Glucose (C) -0.2 -0.1 N.D. N.D. N.D.
carbon source Fumarate (C) -0.1 -0.2 N.D. N.D. N.D.
carbon source L-tyrosine (C) -0.2 -0.0 N.D. N.D. N.D.
carbon source Gly-Glu (C) -0.1 -0.2 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.2 N.D. N.D. N.D.
phage V2_10 -0.2 -0.0 N.D. N.D. N.D.
carbon source Adenine (C) -0.2 -0.0 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.1 N.D. N.D. N.D.
carbon source L-Threonine (C) -0.1 +0.1 N.D. N.D. N.D.
carbon source D-Ribose (C) -0.1 +0.1 N.D. N.D. N.D.
carbon source L-Alanine (C) -0.1 +0.2 N.D. N.D. N.D.
carbon source Glycerol (C) -0.1 +0.2 N.D. N.D. N.D.
phage V2_10 +0.2 -0.0 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.0 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.0 N.D. N.D. N.D.
plant outgrowth control Plant outgrowth control +0.2 -0.0 N.D. N.D. N.D.
carbon source D-Xylose (C) +0.1 +0.1 N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.2 +0.0 N.D. N.D. N.D.
carbon source L-Arabinose (C) +0.2 +0.0 N.D. N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.0 N.D. N.D. N.D.
carbon source L-Arabinose (C) +0.1 +0.1 N.D. N.D. N.D.
carbon source D-Mannose (C) +0.1 +0.1 N.D. N.D. N.D.
carbon source L-Fucose (C) +0.2 +0.1 N.D. N.D. N.D.
r2a outgrowth control R2A outgrowth control +0.2 +0.0 N.D. N.D. N.D.
carbon source D-Serine (C) +0.1 +0.1 N.D. N.D. N.D.
carbon source L-Histidine (C) +0.2 +0.1 N.D. N.D. N.D.
carbon source casaminos (C) +0.1 +0.1 N.D. N.D. N.D.
carbon source butyrate (C) +0.2 +0.2 N.D. N.D. N.D.
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