Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01610 and ABID97_RS01615 are separated by 90 nucleotidesABID97_RS01615 and ABID97_RS01620 are separated by 47 nucleotidesABID97_RS01620 and ABID97_RS01625 overlap by 4 nucleotidesABID97_RS01625 and ABID97_RS01630 are separated by 37 nucleotides ABID97_RS01610: ABID97_RS01610 - DUF3597 domain-containing protein, at 317,149 to 317,535 _RS01610 ABID97_RS01615: ABID97_RS01615 - serine endopeptidase, at 317,626 to 318,735 _RS01615 ABID97_RS01620: ABID97_RS01620 - DUF2145 domain-containing protein, at 318,783 to 319,577 _RS01620 ABID97_RS01625: ABID97_RS01625 - hypothetical protein, at 319,574 to 320,035 _RS01625 ABID97_RS01630: ABID97_RS01630 - YiaA/YiaB family inner membrane protein, at 320,073 to 320,576 _RS01630
Group Condition ABID97_RS01610 ABID97_RS01615 ABID97_RS01620 ABID97_RS01625 ABID97_RS01630
carbon source D-Galactose (C) +0.0 -0.5 -0.2 -0.4 +0.0
carbon source L-Proline (C) -0.3 -0.0 -0.2 -0.2 -0.2
phage V2_100 -0.7 -0.2 -0.1 +0.2 -0.2
carbon source D-Arabinose (C) -0.1 -0.2 -0.1 -0.5 +0.0
carbon source Formate (C) -0.4 -0.3 -0.2 +0.1 +0.0
carbon source D-Serine (C) -0.0 -0.4 -0.2 -0.3 +0.1
carbon source L-Lactate (C) -0.3 -0.1 -0.2 -0.2 +0.0
carbon source Fumarate (C) -0.3 +0.1 -0.0 -0.4 -0.1
carbon source L-Proline (C) -0.6 -0.1 -0.0 -0.1 +0.1
phage V1_1 -0.2 -0.1 +0.1 -0.4 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.3 -0.1 -0.4 +0.2
carbon source butyrate (C) +0.3 -0.0 +0.0 -0.7 -0.1
carbon source D,L-Malic Acid (C) +0.2 -0.1 -0.3 -0.2 -0.0
carbon source D-Glucose (C) -0.3 +0.1 -0.2 -0.3 +0.1
carbon source butyrate (C) +0.2 -0.2 -0.1 -0.3 +0.1
carbon source propionate (C) -0.2 -0.4 +0.0 -0.4 +0.7
phage V2_10 +0.1 -0.4 +0.1 -0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.2 +0.2 -0.1 +0.1
phage V1_10 -0.2 -0.2 +0.2 -0.1 +0.2
carbon source a-Ketoglutaric (C) +0.4 -0.2 -0.2 -0.0 +0.2
carbon source L-Alanine (C) -0.0 -0.2 -0.2 +0.5 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 +0.3 +0.2 -0.0
carbon source D-Mannose (C) +0.3 +0.3 -0.1 -0.3 +0.1
carbon source Tween 20 (C) -0.1 +0.2 -0.1 +0.2 +0.2
carbon source L-tyrosine (C) +0.4 +0.5 -0.1 -0.1 -0.1
carbon source D-Xylose (C) +0.2 +0.0 +0.2 -0.2 +0.2
carbon source propionate (C) -0.1 +0.2 -0.1 -0.1 +1.1
r2a outgrowth control R2A outgrowth control +0.5 +0.1 +0.2 +0.2 +0.0
carbon source D-Xylose (C) +0.1 +0.3 +0.4 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.1 +0.3 +0.9 -0.0
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ABID97_RS01610
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