Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01605 and ABID97_RS01610 are separated by 74 nucleotidesABID97_RS01610 and ABID97_RS01615 are separated by 90 nucleotidesABID97_RS01615 and ABID97_RS01620 are separated by 47 nucleotidesABID97_RS01620 and ABID97_RS01625 overlap by 4 nucleotides ABID97_RS01605: ABID97_RS01605 - SDR family oxidoreductase, at 316,286 to 317,074 _RS01605 ABID97_RS01610: ABID97_RS01610 - DUF3597 domain-containing protein, at 317,149 to 317,535 _RS01610 ABID97_RS01615: ABID97_RS01615 - serine endopeptidase, at 317,626 to 318,735 _RS01615 ABID97_RS01620: ABID97_RS01620 - DUF2145 domain-containing protein, at 318,783 to 319,577 _RS01620 ABID97_RS01625: ABID97_RS01625 - hypothetical protein, at 319,574 to 320,035 _RS01625
Group Condition ABID97_RS01605 ABID97_RS01610 ABID97_RS01615 ABID97_RS01620 ABID97_RS01625
carbon source D-Xylose (C) -4.8 +0.1 +0.3 +0.4 +0.3
carbon source D-Xylose (C) -3.3 +0.2 +0.0 +0.2 -0.2
carbon source D-Serine (C) -0.4 -0.0 -0.4 -0.2 -0.3
carbon source D-Galactose (C) -0.2 +0.0 -0.5 -0.2 -0.4
carbon source L-Fucose (C) -0.7 +0.1 -0.1 -0.1 -0.2
carbon source L-Proline (C) -0.2 -0.3 -0.0 -0.2 -0.2
phage V1_1 -0.3 -0.2 -0.1 +0.1 -0.4
carbon source D-Glucose (C) -0.2 -0.3 +0.1 -0.2 -0.3
carbon source propionate (C) -0.6 -0.1 +0.2 -0.1 -0.1
carbon source D-Arabinose (C) +0.2 -0.1 -0.2 -0.1 -0.5
carbon source Formate (C) +0.3 -0.4 -0.3 -0.2 +0.1
phage V2_100 +0.2 -0.7 -0.2 -0.1 +0.2
carbon source propionate (C) +0.5 -0.2 -0.4 +0.0 -0.4
carbon source L-Arabinose (C) +0.4 -0.2 -0.2 -0.0 -0.2
carbon source butyrate (C) +0.2 +0.3 -0.0 +0.0 -0.7
carbon source L-Alanine (C) -0.1 -0.0 -0.2 -0.2 +0.5
carbon source Glycolic Acid (C) +0.4 +0.0 -0.1 -0.3 -0.1
carbon source butyrate (C) +0.4 +0.2 -0.2 -0.1 -0.3
carbon source D,L-Malic Acid (C) +0.6 +0.2 -0.1 -0.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.2 -0.3 +0.3 +0.2
carbon source a-Ketoglutaric (C) +0.3 +0.4 -0.2 -0.2 -0.0
carbon source D-Mannose (C) +0.1 +0.3 +0.3 -0.1 -0.3
carbon source L-Leucine (C) +0.2 -0.1 +0.3 -0.3 +0.1
carbon source L-Arabinose (C) +0.3 +0.3 -0.0 -0.1 -0.3
carbon source L-tyrosine (C) +0.1 +0.4 +0.5 -0.1 -0.1
carbon source L-Histidine (C) +0.7 +0.3 -0.0 -0.1 -0.0
r2a outgrowth control R2A outgrowth control -0.1 +0.5 +0.1 +0.2 +0.2
carbon source Glucuronamide (C) +0.9 +0.1 +0.0 -0.1 -0.1
carbon source Glucuronamide (C) +1.0 +0.0 -0.2 +0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.0 +0.1 +0.3 +0.9
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ABID97_RS01605
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ABID97_RS01610
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ABID97_RS01625
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