Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS01265 and ABID97_RS01270 are separated by 182 nucleotidesABID97_RS01270 and ABID97_RS01275 are separated by 51 nucleotidesABID97_RS01275 and ABID97_RS01280 are separated by 124 nucleotidesABID97_RS01280 and ABID97_RS01285 are separated by 37 nucleotides ABID97_RS01265: ABID97_RS01265 - MFS transporter, at 258,472 to 259,824 _RS01265 ABID97_RS01270: ABID97_RS01270 - ABC transporter substrate-binding protein, at 260,007 to 261,137 _RS01270 ABID97_RS01275: ABID97_RS01275 - tripartite tricarboxylate transporter substrate binding protein, at 261,189 to 262,127 _RS01275 ABID97_RS01280: ABID97_RS01280 - flavodoxin family protein, at 262,252 to 262,839 _RS01280 ABID97_RS01285: ABID97_RS01285 - fumarylacetoacetate hydrolase family protein, at 262,877 to 263,782 _RS01285
Group Condition ABID97_RS01265 ABID97_RS01270 ABID97_RS01275 ABID97_RS01280 ABID97_RS01285
carbon source Glucuronamide (C) +0.1 -0.2 -0.2 -0.9 N.D.
carbon source L-Alanine (C) -0.0 -0.1 +0.1 -0.9 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.6 +0.1 -0.5 N.D.
carbon source Glucuronamide (C) -0.1 -0.2 -0.2 -0.5 N.D.
phage V2_1 -0.2 +0.1 +0.1 -0.7 N.D.
carbon source L-Phenylalanine (C) +0.2 -0.2 -0.1 -0.5 N.D.
carbon source L-Fucose (C) -0.1 -0.5 +0.2 -0.1 N.D.
carbon source L-Histidine (C) +0.0 -0.5 -0.1 +0.3 N.D.
carbon source L-Arabinose (C) +0.1 -0.8 +0.3 +0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.2 +0.5 -0.5 N.D.
carbon source L-tyrosine (C) -0.1 -0.3 -0.1 +0.4 N.D.
carbon source L-Proline (C) +0.1 -0.6 -0.0 +0.4 N.D.
carbon source Formate (C) -0.1 -0.1 -0.2 +0.5 N.D.
carbon source Fumarate (C) -0.1 -0.3 +0.0 +0.6 N.D.
carbon source butyrate (C) -0.3 -0.2 +0.2 +0.5 N.D.
carbon source L-Leucine (C) +0.0 -0.4 +0.1 +0.5 N.D.
carbon source L-Lactate (C) +0.0 -0.3 +0.1 +0.5 N.D.
carbon source L-Asparagine (C) -0.1 -0.2 -0.0 +0.6 N.D.
carbon source D-Xylose (C) -0.1 -0.3 +0.2 +0.6 N.D.
carbon source L-Threonine (C) -0.0 -0.3 -0.1 +0.8 N.D.
carbon source Formate (C) +0.1 -0.2 +0.1 +0.5 N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.2 +0.2 +0.4 N.D.
carbon source L-Threonine (C) +0.1 -0.2 +0.1 +0.6 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 +0.1 +0.7 N.D.
carbon source D,L-Lactate (C) -0.1 -0.3 +0.2 +0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.4 -0.1 N.D.
phage V2_100 +0.3 +0.0 +0.1 +0.5 N.D.
carbon source L-Tryptophan (C) -0.0 +0.0 +0.2 +0.8 N.D.
carbon source D-Ribose (C) +0.0 +0.2 +0.1 +0.7 N.D.
carbon source D-Glucuronic Acid (C) -0.2 +0.7 +0.1 +0.5 N.D.
remove
ABID97_RS01265
plot		 remove
ABID97_RS01270
plot		 remove
ABID97_RS01275		 remove
ABID97_RS01280
plot		 remove
ABID97_RS01285
plot