Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS01175 and ABID97_RS01180 are separated by 192 nucleotidesABID97_RS01180 and ABID97_RS01185 are separated by 35 nucleotidesABID97_RS01185 and ABID97_RS01190 are separated by 3 nucleotidesABID97_RS01190 and ABID97_RS01195 are separated by 218 nucleotides ABID97_RS01175: ABID97_RS01175 - D-xylose ABC transporter substrate-binding protein, at 241,702 to 242,724 _RS01175 ABID97_RS01180: ABID97_RS01180 - hypothetical protein, at 242,917 to 243,255 _RS01180 ABID97_RS01185: ABID97_RS01185 - NAD(P)-dependent oxidoreductase, at 243,291 to 244,193 _RS01185 ABID97_RS01190: ABID97_RS01190 - SDR family oxidoreductase, at 244,197 to 244,958 _RS01190 ABID97_RS01195: ABID97_RS01195 - 2-hydroxyacid dehydrogenase, at 245,177 to 246,097 _RS01195
Group Condition ABID97_RS01175 ABID97_RS01180 ABID97_RS01185 ABID97_RS01190 ABID97_RS01195
carbon source D-Glucose (C) -3.9 N.D. -0.6 -0.1 -0.2
carbon source D-Glucose (C) -2.6 N.D. -0.5 -0.2 -0.3
carbon source D-Xylose (C) -1.8 N.D. -0.2 -0.1 -1.3
carbon source Formate (C) +0.2 N.D. +0.1 -0.3 -2.1
carbon source D-Xylose (C) -2.1 N.D. +0.0 -0.1 +0.5
carbon source D-Glucuronic Acid (C) +0.1 N.D. -0.4 -1.0 -0.1
carbon source succinate (C) +0.2 N.D. -0.3 -0.3 -1.0
carbon source L-Glutamine (C) -0.1 N.D. -0.2 +0.2 -1.3
phage V2_10 +0.4 N.D. +0.3 +0.2 -2.1
carbon source D-Gluconic Acid (C) -0.5 N.D. +0.2 +0.2 -0.8
carbon source L-tyrosine (C) +0.4 N.D. -0.6 +0.3 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 N.D. -0.1 -0.6 +1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 N.D. +0.5 -0.7 +1.3
phage V2_100 +0.5 N.D. -0.3 +0.5 -0.7
carbon source 4-Hydroxybenzoic Acid (C) +0.7 N.D. +0.4 +0.2 -0.9
carbon source casaminos (C) +0.3 N.D. +0.3 +0.3 -0.6
plant outgrowth control Plant outgrowth control -0.4 N.D. +0.1 -0.3 +1.1
plant outgrowth control Plant outgrowth control -0.5 N.D. +0.1 +0.3 +0.9
carbon source butyrate (C) +0.1 N.D. -0.4 +0.7 +0.6
r2a outgrowth control R2A outgrowth control +0.0 N.D. +0.2 -0.3 +1.1
carbon source L-Fucose (C) +0.3 N.D. -0.1 +0.2 +0.9
carbon source D-Serine (C) +0.6 N.D. +0.3 -0.1 +0.8
carbon source 2-Deoxy-D-Ribose (C) +1.0 N.D. +0.2 +0.1 +0.3
carbon source acetate (C) -0.1 N.D. +0.0 +0.1 +1.7
carbon source 4-Hydroxybenzoic Acid (C) +0.8 N.D. +0.1 +0.4 +0.5
carbon source Glucuronamide (C) +3.1 N.D. -0.0 +0.4 -1.4
carbon source propionate (C) +0.5 N.D. -0.3 +0.3 +1.7
carbon source L-tyrosine (C) +1.2 N.D. +0.3 +0.3 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 N.D. +0.1 -0.5 +4.5
carbon source Glucuronamide (C) +3.4 N.D. -0.2 +0.3 +0.6
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ABID97_RS01175
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