Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS01150 and ABID97_RS01155 are separated by 7 nucleotidesABID97_RS01155 and ABID97_RS01160 are separated by 142 nucleotidesABID97_RS01160 and ABID97_RS01165 are separated by 40 nucleotidesABID97_RS01165 and ABID97_RS01170 are separated by 1 nucleotides ABID97_RS01150: ABID97_RS01150 - helix-turn-helix domain-containing protein, at 234,663 to 235,928 _RS01150 ABID97_RS01155: ABID97_RS01155 - membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family, at 235,936 to 238,380 _RS01155 ABID97_RS01160: ABID97_RS01160 - ROK family transcriptional regulator, at 238,523 to 239,683 _RS01160 ABID97_RS01165: ABID97_RS01165 - ATP-binding cassette domain-containing protein, at 239,724 to 240,500 _RS01165 ABID97_RS01170: ABID97_RS01170 - ABC transporter permease, at 240,502 to 241,692 _RS01170
Group Condition ABID97_RS01150 ABID97_RS01155 ABID97_RS01160 ABID97_RS01165 ABID97_RS01170
carbon source D-Xylose (C) +0.1 -0.1 -0.0 -2.2 -2.2
carbon source D-Xylose (C) -0.1 -0.0 +0.4 -2.0 -1.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.2 -1.3 -1.4 -0.7
carbon source D-Glucose (C) +0.2 -0.2 +4.5 -3.7 -3.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.2 -0.1 -0.9 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 -0.3 -0.8 -0.5
carbon source L-Phenylalanine (C) -0.2 +0.0 -0.9 +0.1 +0.1
carbon source D-Glucose (C) +0.2 -0.1 +4.6 -2.6 -2.9
carbon source D-Mannose (C) +0.1 -0.4 +0.5 -0.6 -0.3
carbon source D,L-Malic Acid (C) -0.3 +0.1 -0.9 +0.2 +0.3
carbon source L-Leucine (C) -0.2 -0.1 -0.7 +0.3 +0.1
carbon source L-Histidine (C) -0.1 +0.2 -0.9 +0.1 +0.2
carbon source acetate (C) -0.0 +0.1 -0.8 +0.3 +0.1
carbon source L-Histidine (C) +0.5 -0.1 -0.3 -0.4 +0.1
carbon source L-Alanine (C) +0.1 +0.1 -0.9 +0.4 +0.2
carbon source L-Arabinose (C) -0.3 +0.2 -0.4 +0.5 +0.1
carbon source Ethanol (C) +0.2 +0.2 -0.7 +0.1 +0.3
carbon source Ethanol (C) +0.2 +0.2 -0.7 +0.3 +0.1
carbon source Formate (C) +0.4 +0.2 -0.5 -0.2 +0.4
carbon source Glycolic Acid (C) -0.2 +0.2 +0.5 -0.3 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.0 -1.0 +0.7 +0.6
phage V2_100 +0.8 +0.4 -0.7 -0.1 +0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.0 -0.3 +0.6 +0.7
carbon source D-Gluconic Acid (C) +0.2 +0.0 +1.6 -0.3 -0.3
carbon source L-Fucose (C) +0.0 +0.0 +0.7 +0.6 -0.1
carbon source D-Gluconic Acid (C) +0.2 -0.0 +2.0 -0.5 -0.3
carbon source propionate (C) +0.4 -0.2 +0.4 +0.8 +0.1
carbon source D-Serine (C) +0.3 +0.1 +0.7 +0.5 +0.3
carbon source Glucuronamide (C) -0.2 +0.2 -0.8 +3.6 +3.3
carbon source Glucuronamide (C) +0.3 +0.3 -0.7 +3.2 +3.1
remove
ABID97_RS01150
plot		 remove
ABID97_RS01155
plot		 remove
ABID97_RS01160		 remove
ABID97_RS01165
plot		 remove
ABID97_RS01170
plot